Brassica rapa (field mustard): 103850114
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Entry
103850114 CDS
T03449
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03420
Nucleotide excision repair
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103850114
09124 Replication and repair
03420 Nucleotide excision repair
103850114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
brp03051
]
103850114
03400 DNA repair and recombination proteins [BR:
brp03400
]
103850114
Proteasome [BR:
brp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103850114
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103850114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
TECR_N
UBA_RAD5A
Dsc3_N
UBA_3
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
103850114
NCBI-ProteinID:
XP_009125074
UniProt:
M4EHZ3
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Position
A07:16458116..16460917
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AA seq
382 aa
AA seq
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MKIFVKTLKGTNFEIEVNPAETISDTKKRIETLHGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVDNSFIVIMLSKAKVSSSGASTASAPAPSATLAQPAQTVATPQVATPTASVPEPPSG
AANVAAPSAAAASTQTDVYGQAASNLVAGNNLESTVQQILDMGGGSWDRDTVIRALRAAF
NNPERAVEYLYSGIPAQAEIPPAPQAPATAGQAANPLAQTQQEATPVPATGGPNANPLNL
FPQGMPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQE
HQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVFFA
CNKNEELAANYLLDHMHEFEEQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtgaagactctcaaagggacaaacttcgagatcgaagtgaatccggcg
gagacgatctctgatactaaaaaacgtatagaaactcttcatggtgctcaatacccagct
gctcagcagatgctgatccaccaaggaaaagttctcaaggatgagactactttggaagag
aacaacgttgttgacaacagtttcattgttatcatgttgtccaaggccaaggtttcttca
agtggggcatcaactgcatctgctccagcacctagtgctactctggctcaacctgcacag
acggtagctacacctcaggttgctactccaactgcctcagttccagagcctccaagtgga
gctgcaaacgttgcagcaccttctgcagcagctgcttcgactcagacagatgtttatgga
caagcagcgtcaaaccttgttgctggtaacaatctagagtccactgttcagcaaattctt
gacatgggtggaggtagttgggaccgtgacactgttatccgtgccctgagagccgccttt
aacaaccctgaaagagctgtcgaatatctctactcaggaatccctgcccaagctgaaatc
ccaccagcccctcaagccccagctactgctggacaggcagcaaaccctctagcacagacc
caacaagaagctactccagtgcctgcaactggtggtcctaacgctaatccgttaaacctg
tttccccagggcatgcccgctgcagatgctggtgctggagctggtaatcttgatttccta
cgtaacagtcaacagttccaagccttgagagctatggtacaagcaaacccgcaaattcta
cagcctatgcttcaagagctcggtaaacaaaacccacagcttgtgcgactcatccaagag
caccaggctgacttcctacgcttgataaatgaacctgtcgagggagaagagaatgtcatg
gaacagttggaagcagcaatgccacaagctgtgaccgtcacacctgaagagcgtgaagcc
attgaacggcttgaagcgatggggtttgatcgtgcgatggtcttagaggtgttctttgcg
tgtaacaagaacgaagaacttgcagctaactaccttctagatcacatgcatgagtttgag
gaacaataa
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