Brassica rapa (field mustard): 103850199
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Entry
103850199 CDS
T03449
Name
(RefSeq) chloride channel protein CLC-a
KO
K05016
chloride channel 7
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103850199
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103850199
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103850199
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103850199
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103850199
Ion channels [BR:
brp04040
]
Chloride channels
Chloride channel (CLC)
103850199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
103850199
NCBI-ProteinID:
XP_009125164
UniProt:
M4EI63
LinkDB
All DBs
Position
A07:complement(16928558..16932114)
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AA seq
770 aa
AA seq
DB search
MDEDGNLQISNSNYNGEEEADPENNTMNQPLLKRHRTLSSTPLALVGTKVSHIESLDYEI
NENDLFKHDWRSRSKAQVLQYIFAKWTLAFLVGLLTGLIATLINLAVENIAGYKLLAVGH
YISQDRYVTGLLVFTGANLGLTLVATVLVVVFAPTAAGPGIPEIKAYLNGIDTPNMFGAT
TMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDR
RDLITCGSASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEIC
NSGKCGLFGKGGLIMFDVSHVEVRYHAVDIIPVTLIGVIGGILGSLYNHLLHKVLRLYNL
INQKGKIHKVLLSLSVSLFTSLCLYGLPFLAECKPCNPSIDEACPTNGRSGNFKQFNCPN
GYYNDLATLFLTTNDDAVRNVFSSNTPNEFGMVSLWIYFGLYCILGLITFGIATPSGLFL
PIILMGSAYGRMLGTVMGPYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLL
LPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELGDAKPPVVT
LRGVEKVANIVDALRNTTHNAFPVLDGDATELHGLILRAHLVKVLKKRWFLNEKRRTEDW
EVREKFTPVELAEREDNFDDVGITSSEMQMYVDLHPLTNTTPYTVVQSMSVAKALVLFRS
VGLRHLLIVPKIQASGMSPVIGILTRQDLRAYNILQAFPHLDKHKSGKLR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacggaaacttacagattagtaatagtaactacaatggagaagaagaagca
gatccagagaataacactatgaaccagccactccttaagagacatagaactctttcttca
actcctcttgctttggtcggtaccaaggtttcacacatcgagagcttagactatgaaata
aacgagaatgatctgttcaagcatgactggagaagcagatcaaaggcacaagtgttgcaa
tacatatttgcaaaatggacattagcttttcttgttggtctcttaactggtctcatagct
actctcatcaacctcgccgtcgaaaacatcgccggttacaaactcctagccgtcggccac
tatatttctcaagacaggtatgtgacaggtctgttggtctttacgggtgcgaatttgggt
ctgactctggtggcgacagtacttgttgttgtctttgctcctacagctgctggtcctggg
atcccagagatcaaagcttatcttaatggcatcgacactcccaatatgtttggtgccacc
accatgatcgttaagattgttggaagtattggagcagttgcagctggacttgatcttggc
aaagaagggcctttggttcatattggaagctgcatagcttctttactcggtcagggtggt
ccagacaaccatagaatcaaatggagatggcttcgttacttcaacaacgacagagaccga
agagatcttattacatgtggatctgcctctggagtatgtgcagctttcagatcaccggta
ggaggagttctcttcgctcttgaggaagtagccacgtggtggagaagcgctcttctatgg
agaactttcttcagtacagctgttgtggtggttgtattgagagcgttcatagagatttgc
aactccggtaaatgcgggctttttggtaaaggaggactcattatgtttgatgtgagtcat
gtagaggttaggtaccatgcagtggatataatccctgttacattgattggtgtcattggt
ggcattcttggaagcttgtacaatcaccttcttcataaagtccttcgtctttacaatctc
atcaaccagaagggtaagattcacaaggtgcttctaagtctttcggtgtctctcttcaca
tcactttgcttgtatgggcttcctttcttagcggaatgcaagccttgtaatccttcgata
gacgaggcatgtccaacaaacggaagatcagggaacttcaagcagttcaactgtcccaac
ggttactacaacgatctagcgaccctgtttctcacaaccaatgatgatgctgtcagaaac
gtgttctcttcaaacactcctaatgagtttggtatggtttccctgtggatatactttggc
ctctactgcattttggggcttatcacattcggtatagccacaccttcgggtctcttttta
ccgatcatcctcatgggttctgcttatggtcggatgctaggcacagtaatgggaccttac
acaaagattgatcaagggctttacgcggttcttggtgcagcttcactcatggctggttcc
atgagaatgactgtttctctctgtgttatattccttgagctcaccaacaaccttcttttg
ttgcccattactatgtttgtgcttctcattgctaaaacagttggagacagcttcaatctt
agtatctacgagatcattctccatcttaagggcttaccattcctggaagcaaatcctgag
ccctggatgaggaatctcactgtaggtgagcttggtgatgctaagcctccggtggttacc
cttcgcggagttgaaaaagttgccaacatagtggatgcactgaggaacacgacgcataat
gccttcccggtattggatggtgatgctacagagcttcatgggttgattttgagagcacat
cttgttaaagtattgaaaaagagatggttcttgaatgagaagagaagaacagaagactgg
gaagtcagggaaaagttcacaccggtggagttggctgagagagaagacaattttgatgat
gttggaatcacaagctcagagatgcaaatgtatgttgatcttcatcctttgaccaacact
acaccttacacagtggtgcagagtatgtcggtggctaaggctttggtgcttttccgatcg
gtcggtctcagacatctgctgattgttcccaagattcaagcttcaggaatgtctcctgtg
atagggatcttaacaaggcaagatctaagggcttataacattctacaagcctttcctcat
ttggataaacacaaaagtgggaagctacgttaa
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