Brassica rapa (field mustard): 103850212
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Entry
103850212 CDS
T03449
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1-like
KO
K11883
RNA-binding protein NOB1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103850212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103850212
03051 Proteasome [BR:
brp03051
]
103850212
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103850212
Proteasome [BR:
brp03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
103850212
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Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
103850212
NCBI-ProteinID:
XP_009125178
UniProt:
M4EI75
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All DBs
Position
A07:complement(16990382..16992827)
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AA seq
576 aa
AA seq
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MESSPASMWSSIVKKDPPSKPPTTDVAPAAILGMVGNCKSTKGISVAVVDANAVIDGRQS
LTDFADKFVTVPEVLSEIRDSDSRRRLEFIPFAIETMEPSPESLSKVIKFAKATGDLHTL
SDVDLKLIALTYTLEAEVHGTKNLRDVPPPIQTVRVKRLPEKELPGWGSNVANLEEWEAL
ENETEENSNTASKILPLKDLNMNILPSDSCYEVGSVVSHTEDDEEGVRRQKKTEVKVEGK
MVVEGIDASQGENDDEDGGDWRPAVSSSTHRKFLRRKAKWEHYNALAEQEIHKDEEADKA
ANLIQDTNDQMSNGAVEKCAKDRGKNDEELSFILKDMRLEEGTEETNLSNGEDDDEVEGE
EIDVASEAGDTFGASSMADDGGSEQSWSLRALSESSVACITGDYAMQNVIIQMGLRLLAP
GGMQIRQLNRWVLKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGENGTIIAARKPRV
TLRGTKFSIPMPKSGRDAITKNLVLREDQLPQKYLHPKTKKKASKPGDEYFISNDVFMNH
HSDRKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMHC
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagtccagcgtcgatgtggagctcaatagtgaagaaagatcctccgtcaaag
cctccaacaaccgacgtagctccggcggcgattctcggcatggtcggaaactgcaaatca
acaaaggggatatcagtggcggttgttgacgcgaacgccgtcatcgacggacgccagagc
ttaaccgacttcgccgacaaattcgtaacggtccctgaagtgctctcggagattcgtgac
tctgattctcgccgtcgtctcgagttcatccctttcgcgatcgaaaccatggaaccatct
cccgaatctctcagtaaagttattaaatttgccaaagctactggtgatttgcatacactc
tctgatgttgatctcaagttgattgctttgacttacacgcttgaggctgaggttcatggg
accaagaatcttagagatgttcctccgccgattcaaactgttagggtgaagagattacct
gagaaggagttacctggctggggatctaatgtggctaacttggaggagtgggaggcactt
gagaatgagactgaggagaactcaaacactgcttccaaaatccttccgcttaaagacctt
aacatgaacatccttccttccgacagctgttacgaggttggttctgttgtgtctcatact
gaggatgatgaagaaggtgtgaggaggcagaagaaaacagaggtgaaggttgagggcaag
atggttgtggaaggaatagatgcatcacagggtgaaaatgatgatgaagatggtggtgat
tggaggcctgcggttagtagcagtactcacaggaagttccttaggagaaaggccaagtgg
gaacattacaatgccttggctgagcaagaaattcacaaagatgaagaagctgacaaagct
gctaacttgatccaggacaccaatgatcagatgtctaatggcgctgttgaaaagtgtgca
aaagataggggaaaaaatgatgaggagctttctttcatcctaaaagatatgaggttggag
gaagggactgaagagacaaatttgagcaatggcgaggatgatgatgaagtggagggtgag
gagatcgatgttgctagtgaggctggtgatacctttggggcatcatcgatggcagatgat
ggtggcagcgagcagagttggtcgttgagagccttatctgagtccagtgtagcttgtata
accggtgactatgcaatgcaaaatgttattattcaaatgggtttgcgtttgcttgcaccc
ggaggtatgcaaattcgccaactaaacaggtgggtgttgaaatgccatgcttgctacaca
gtaactcctgaaattggaagaatcttctgtcccaagtgcggtaatgggggcactctgcga
aaggtagcggttacaataggcgagaatggcaccatcatagctgcacgtaaacctcgtgtt
acacttcgagggaccaaattttcgataccaatgcctaaaagcggaagagacgcaatcacc
aagaatctggtactgagggaagatcaacttcctcaaaagtatctccatcccaagaccaag
aagaaagcaagcaaaccgggagatgagtattttatatcaaacgatgtgttcatgaaccat
cacagtgatagaaaagcaccattgcagcctcctgtgagaaaagctatggccgttttcagt
cagaaacggaaccctaatgacaaccattactctcgctctatgcactgttga
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