Brassica rapa (field mustard): 103850248
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Entry
103850248 CDS
T03449
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03060
Protein export
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
103850248
04141 Protein processing in endoplasmic reticulum
103850248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103850248
04131 Membrane trafficking [BR:
brp04131
]
103850248
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103850248
Enzymes [BR:
brp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
103850248
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP70 / DNAK
103850248
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
103850248
Autophagy
ER-phagy
ER stress-related proteins
103850248
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103850248
Exosomal proteins of other body fluids (saliva and urine)
103850248
Exosomal proteins of colorectal cancer cells
103850248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
Radial_spoke_3
DDR
DUF7357
Motif
Other DBs
NCBI-GeneID:
103850248
NCBI-ProteinID:
XP_009125214
UniProt:
A0A3P6B796
M4EIA6
LinkDB
All DBs
Position
A07:complement(17199322..17204924)
Genome browser
AA seq
665 aa
AA seq
DB search
MARSFGAVLAIIFFGFLFASFSTAKEEEATTKLGTVIGIDLGTTYSCVGVYKNGHVEIIA
NDQGNRITPSWVAFTDSARLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKLV
PYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAY
FNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVL
TIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHQKDISKDNKALGKLRRECERA
KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQ
IDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKD
ILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLT
KDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRL
SQEEIDRMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQVSDKDKLADKLEAEEKEK
IEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGASPTEDEEDE
SHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcattcggagctgttctggcgatcattttctttggattcttatttgcgtcg
ttttccactgctaaagaagaagaggccaccaccaagttgggaacggtgatagggatagat
cttggtaccacctactcttgtgttggtgtttacaagaatggtcatgttgaaatcattgcc
aatgaccaaggcaaccgtatcacaccttcatgggttgctttcaccgactccgcaaggctc
attggtgaggctgctaagaaccaggctgctgttaatcccgagaggaccatctttgacgtc
aagagattgataggccgaaaattcgaggacaaagaagtccaaaaggacaggaagcttgtg
ccttaccagattgttaacaaggatggcaagccctacattcaagtcaagatcaaggatggt
gagacaaaggttttctctcccgaggagatcagtgccatgattctcactaagatgaaggag
actgctgaagcttaccttggcaagaaaatcaaggacgccgttgtcactgttccagcttac
ttcaacgatgcccagaggcaggctacaaaggatgctggtgttatagctggtctcaatgtt
gccagaatcatcaacgaacccactgctgctgctattgcctatggtcttgataagaagggt
ggtgagaagaacatccttgtctttgaccttggtggtggtacctttgatgtcagtgtcttg
accattgataacggtgtcttcgaggttctctccacaaatggtgacactcacttgggaggt
gaggactttgaccacaggatcatggattacttcatcaagttgatcaagaagaagcaccaa
aaagacatcagcaaggacaacaaggctcttggtaagctccgcagggaatgtgagagagcc
aagagagctcttagtagccagcaccaagtccgtgtagagatcgagtcactcttcgatggt
gttgatttctccgagcctctcaccagagctcgtttcgaggagctgaacaatgacttgttc
aggaagacaatgggacccgtgaagaaggccatggatgatgctggtctacaaaagagtcag
atcgatgagattgtcctcgttggtggaagcactaggatccccaaggtccagcagctgctg
aaggacttcttcgaagggaaagagccgaacaagggtgtgaaccctgacgaggctgttgct
tatggtgctgctgtccagggtggtattttgagcggagaaggcggtgatgagaccaaagat
atacttttacttgacgttgcaccactcactttgggtattgagacagttggaggagtgatg
acaaaactgatcccgagaaacacagttattccaacaaagaagtctcaggttttcacgaca
taccaagaccagcagacaaccgtctccattcaggtctttgaaggcgagcgaagtctcact
aaggactgcaggctcctcgggaaattcgaccttaccggaatcccaccggccccaagagga
acaccacaaattgaagtaacgtttgaagtggacgcgaacggtatcctgaacgtgaaagca
gaggacaaggcgagtggtaaatcagagaagatcacaatcacaaacgagaagggacgtctg
agccaggaagagatagacaggatggtgaaggaggcagaggagtttgcagaggaagacaag
aaggtgaaggaaaggatcgacgccaggaacagcctggagacatacgtgtacaacatgaag
aaccaagtaagcgacaaggacaagctcgctgataaactggaggccgaggagaaggagaag
atagaagcagccaccaaagaagctttggagtggcttgacgagaaccaaaactctgagaaa
gaagagtatgacgagaagttgaaggaagtagaggcagtgtgtaacccgatcatcacggcc
gtttatcagaggtcaggtggtgcaccaggtgcatcaccgaccgaggacgaggaggatgag
tctcacgacgagctctaa
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