Brassica rapa (field mustard): 103850288
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Entry
103850288 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103850288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103850288
03036 Chromosome and associated proteins [BR:
brp03036
]
103850288
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103850288
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103850288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
103850288
NCBI-ProteinID:
XP_009125264
UniProt:
M4D4J1
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All DBs
Position
A01:complement(2444711..2448682)
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AA seq
722 aa
AA seq
DB search
MPGMNPKPSDGLPNGGELVPFSTKENSPAVYPLRYSLKSRPHRLSISWGCGNNLRVTVLR
NPEPRDDDDGGEAGGEVVNVRLSGEDGEIGDAQWRRIAYGSVSPFALLQSRRNSISSLFK
MDTSPSLYQTAWWEYVMEYSKEIKSLLSDSVSSPAPLIEDPRSVIKSAEEPTCLKAAWEL
MEMFYADKTCLSWWPERLVDWLSDYDVLLSSAHPTIYSKLEDFQKELVGLQAIEDDPRYW
EVMSSALSVGWLEIVVKLLHLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPKLEAG
MFGECFAAKPDFMKTRERWQSQITKLECSAFWVQCAHRPTREGLRNMLKIMMGNADCLSA
ATSNWMELFVSHLLYLRPFTKGLEGMHNLAQKCVESKPVNTSHKLLRLLIGILGENTEVV
LAVCSKEFGSWMVAHAMELLTAGSEEGEVLVHEEQRNLGGINMEELHRLVYAQVLSSHAL
TWQIAPVYLSSCEKQGLGLLELLFYRQPVQDNQLLIKSLEICRLYELGYVSAKLMKISGV
HHWKHGRKGSGIFWLQQARDEHSLKVISQQLFDSVGKSLSDESLKQWEGLVELLGSDSQI
SGGLDFLHKYRDFKRSLNLVKDGKAIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKL
LNWPERSLLNVTQTNLMLNKLQEASIAKIRPGFIESDLSAQAVSSVRLALATNLGRAFLE
EC
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtatgaatccgaaacccagcgacggattacccaacggcggagaattagttccg
ttttcgaccaaggagaactctccggcggtgtatcctcttcgctacagcctcaagtctcgg
cctcacaggctctccatctcctgggggtgcgggaacaacctccgcgtcacggttttacgc
aatccggagccgcgcgatgacgacgacggcggagaagctggcggcgaggtggtgaacgtg
aggcttagcggcgaggacggcgagatcggcgacgcgcagtggcggaggatcgcttatgga
tctgtttctccgtttgcgcttttgcagagcaggagaaactcgatttcgagcttgtttaag
atggatacgagtccgtctctgtaccagactgcgtggtgggagtatgtgatggagtacagt
aaggagattaagtctcttcttagtgattcagtgtcttctcctgctcctttgattgaagat
ccaagatcagttataaagagtgctgaggaaccgacttgtttaaaggctgcgtgggagttg
atggaaatgttttatgctgacaagacatgtctgtcttggtggccagaacggctcgttgac
tggctatctgattatgatgtacttctgtcaagtgcacatccaactatctactcaaagctc
gaggatttccaaaaggaacttgttggcctacaggctatcgaggatgatccaagatactgg
gaagtgatgtcatctgctttatcagttggttggctagagatagtggtgaagttgttacac
ttgcatggttcttatcaactagaccagctaggaaatcgtgagacagaaaatggtctggta
gaagctgtcgctgttctcatttcaaaaatgccacggatgcgtccaaaactagaagctggt
atgtttggtgaatgctttgcagcaaagcctgattttatgaagacacgagaaagatggcag
tctcagataactaaactagagtgcagtgccttctgggttcaatgtgctcaccgtccgacc
cgcgagggcttgagaaatatgttgaagatcatgatgggaaatgccgattgcctctcagct
gcgacatctaactggatggagttgtttgtttcacatttactctatctcaggccattcacg
aagggactagaaggcatgcataaccttgctcagaaatgtgttgagtcaaagccagttaac
acttcccataagcttctgaggctgcttattggaattcttggagagaatactgaggttgtg
ctggcagtttgttccaaagagtttggctcctggatggttgcacatgcgatggagttattg
acagctggaagcgaagaaggggaagttcttgtacatgaggagcagcgaaacttgggtgga
atcaacatggaagagctccatagacttgtctatgctcaagttctttcttctcatgctttg
acttggcagatagctcctgtttatctatcatcctgcgagaaacagggcctaggcttatta
gaattgttgttctataggcagccagttcaagacaatcagctgcttattaagagtctagag
atttgccgtctatatgaacttggttatgtcagtgctaaacttatgaagatctctggagtg
catcactggaaacatgggaggaaagggtctgggattttttggcttcagcaagcacgggac
gagcactctctcaaagtgatttctcaacagctgtttgattctgttggaaagtcattgtcc
gatgaaagtctcaagcaatgggaaggcctggtcgaactgctgggttccgactcgcagatc
tctggtggtcttgattttcttcacaagtatagagatttcaagagatcactgaatctcgtc
aaggatggaaaagccatagatgcggctcacgaagctgtggagagacttgtatcgctaatg
aagagcccctctactcctcaacgcttctggcttcctctgctgcatgattcattgaagctg
ttgaattggccagagcgttcgctgttgaatgtaacacagaccaacctgatgttgaacaaa
ctacaggaagcatccattgcaaagataagaccaggcttcatagaatctgatttgtctgct
caagctgtgagttctgtgagactcgctctagcaacaaatctcggacgtgctttcctggaa
gagtgttag
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