Brassica rapa (field mustard): 103850312
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Entry
103850312 CDS
T03449
Name
(RefSeq) elongation factor 1-alpha 1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103850312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103850312
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103850312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
103850312
NCBI-ProteinID:
XP_009125287
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Position
A02:1731987..1736464
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AA seq
714 aa
AA seq
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MPRKGFSNFDDYDDGFDDDYDYDVDVEEDEHEAAEPKEQVVIAKRGLWRCAICTYDNDES
MHVCDICGVIHYPVPGGNKTISNNTVEGRCKEPMVSKLAKSLFESNSLKKGVLYQPEHKN
LVLAQGALPRISRGNIHDLHKAFSSKNSSVSSIAPFKFDAPSPDDLVSNGLKSSRTGPKD
SMKNKEKQDSAEHNQTSSQGRHDNVGVGGIQSFKSLPKAKADKSKETSSSSKNMEVSESL
TSTMNNMSLTGETETSRDVKIRSAKSKSNHKPEEWMMLDKESDALSQLNLAIVGHVDSGK
STLSGRLLHLLGRISQKQMHKFEKEAKSQGKGSFAYAWALDESAEERERGITMTVAVAYF
NSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASIGAFEAGFDNLKGQTREHARV
LRGFGVEQVIVAVNKMDIVGYSKERFELIKQHVGSFLHSCRFKESSLTWIPLSAMENQNL
VAAPSESRLSSWYRGPCLLEAVDSVKSPDRDVLKPLLMPICDVVRSSSGQVSACGKLEAG
AVRSGSKVMVMPSGDQGTVKSLERDSQGCSIARAGDNVAIALQGIDANQVMAGGVLCHPD
YPVSVATRLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGEATKKSP
RCLTAKQSAMLEVSLQYPVCVETFSESRALGRVFLRSSGRTVAMGKVTRIIQDS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaaggattctccaatttcgacgattatgatgatggtttcgatgatgattat
gactatgatgttgatgtagaagaagatgaacacgaagctgctgaacccaaggagcaagta
gtaattgcaaagcgagggctttggcgatgtgcgatatgtacatatgacaatgatgagagt
atgcatgtttgtgatatttgcggtgttattcattatcctgtgcccggtggaaacaaaacc
atcagtaacaatacagttgaaggcagatgcaaagaaccaatggtatccaaattggcaaag
tcccttttcgaatcgaattcactgaaaaagggtgtcctctatcagcctgagcacaagaat
cttgtgttggcacagggagctctgcctagaatttcccgtgggaacattcacgatctccac
aaggcttttagttctaaaaattcatccgttagtagtatagcaccgttcaagtttgatgct
ccatcgccagatgatttagtctccaatggactaaaatcctcgagaactggtccaaaagat
agcatgaagaataaagagaagcaagatagcgcagaacataatcagacaagctcccaaggt
aggcacgataacgttggcgttggcggcatacaatctttcaaaagtttgccaaaagcaaaa
gcagataaatctaaggagacaagctcttcgtcaaaaaacatggaggtgtcggagagtctt
actagtactatgaacaatatgtctttgactggggaaacagaaacctccagggatgtaaaa
attagaagtgcaaaatcaaaatcaaatcataagccagaggagtggatgatgcttgataaa
gaatcggatgcactaagtcaactgaatcttgccattgtgggacatgttgattccggtaag
tcaacactttcgggtaggctactgcatctgttgggaagaatatctcaaaaacaaatgcac
aagtttgagaaagaagcaaagtcgcagggcaaaggctcctttgcatacgcctgggcacta
gacgagagtgccgaagagagggagcgaggaataacaatgacagtagccgtcgcctacttc
aactccaaaagacaccacgtcgtcctcctcgactctccaggccacaaagacttcgttccc
aacatgatagcaggagcaacgcaagcagacgcagcgatcctcgtcatagacgcatccatc
ggcgccttcgaagccggtttcgacaacttgaaaggccagacgagggagcacgcccgcgtt
ctcagaggcttcggggtggagcaagtcatagttgcggtcaacaagatggacatcgttggc
tactccaaggagaggtttgagctgatcaagcagcacgttgggtcgtttcttcattcttgt
cggtttaaagaatcgtctctgacgtggattccgttgagcgccatggagaatcagaacttg
gttgcggctccctcagaaagccgcttgtcgtcgtggtaccgaggtccttgtctgttggag
gcagttgactctgtcaagtctcctgacagagacgtgttaaagcctctgctgatgcctata
tgcgacgttgtgaggtcgagttcagggcaggtgtctgcttgtggtaaacttgaagctgga
gctgttcggtcaggctccaaggtaatggttatgccatcgggagatcaaggaaccgtgaag
tctctggagcgtgactctcagggctgcagcattgcaagagcgggggataacgtggcgata
gctttgcaagggatcgatgcgaatcaagtgatggcaggaggtgtgctgtgccatcctgat
taccctgtttcggtagcgactcgtttggagttgatggtgcttgttttggaaggagctaca
ccgatcttgctcggttctcagttggagtttcatgtgcaccatgcgaaggaggcagcaacg
gttgtgaagcttgtggcgatgcttgatcccaaaacaggggaggcgacaaagaagtctcct
cgttgtttaactgctaaacagagtgcaatgcttgaggtgagtcttcagtatccagtttgt
gtggagacgttttctgagagtagagcccttggaagagtgttccttagatcatcaggaaga
acagtcgctatgggcaaagttactcggattatccaagactcgtaa
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