Brassica rapa (field mustard): 103850353
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Entry
103850353 CDS
T03449
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103850353
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
General mRNP proteins
103850353
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103850353
NCBI-ProteinID:
XP_009125340
UniProt:
M4EIJ7
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All DBs
Position
A02:complement(1569200..1572765)
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AA seq
546 aa
AA seq
DB search
MEFDEYEYLEKTVEEGDASADRKKEGSGNGNGNEKSERSYRKREGERRDEEERGSSRSKK
SRGDDDEENGGGRRDREKERHRSSRDKDRERGGSRDRERSSRERDRSDREKSRDRERGGS
RDRERDRSDREKSRDRERREREKDRERRQRERRSSSRSRREEREREVVERGSRRHRDKKD
EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY
DVMSVPMAIAMSGQLFLGQPVMVKPSEAEKNLAQSTTTAGGGTGPVDRKLYVGNLHFNMT
ELQLRQIFEPFGPVELVQLPCDLETGQCKGFGFIQFAQVEHSKAAQIALNGKLEIAGRTI
KVSSVADHIGTQDGNPKSADFDDDDGGGLALNAQSRVLLMQKLDRTGLAASIGVPSLNGT
AINQPGMNPGFPTSVLPTTALPSVVTEPIGQPSECLLLKNMFDPATETELNFDEDIKEDV
GDECSKYGEVKDIYVDKNSAGFVYLRFESVQAAMAAQRAMHTRWFAQKMISATFLPPHEY
EARAKP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctggagaagacggtggaggaaggagatgcatcggcg
gataggaagaaggaaggtagcgggaacgggaacgggaacgagaagagcgagaggagttac
aggaagagagaaggagagaggcgcgacgaagaagagcgagggagcagtcggagtaagaag
tctcgtggagatgacgacgaagagaacggtggaggtaggagggatcgggagaaagagagg
cacaggagcagccgagacaaggatagagagaggggaggatctagagatagagagaggagt
agcagagagagggacaggagcgatagggagaagagccgagacagagagaggggagggtcg
agagacagagagagagataggagcgatagggagaagagcagagacagagagaggagagag
agggagaaggatagagagaggaggcagagggagaggagaagcagcagtaggtcaaggagg
gaggagagggaacgggaagtagttgaaagaggaagcaggagacacagggacaagaaagat
gagcctgaagctgatccagagagggatcaaagaactgtctttgcatatcagatgcctctt
aaagctaccgagagagatgtttatgagttcttctccaaagctggcaaggtcagggatgtg
cgactgatcatggacagaaactcaagacgatctaaaggagtcgggtatatcgagttttat
gatgtgatgtcagtcccaatggccatagctatgtctggacagctatttcttggacaacct
gtgatggttaagccctctgaagctgaaaagaatttggctcaatccactactactgcaggt
ggtggtactggtcctgttgataggaagctgtatgtgggaaacttgcatttcaacatgaca
gagttgcagcttagacagatttttgagccgtttggtcctgttgagcttgttcagcttcct
tgtgacctcgagactgggcagtgcaagggttttggattcattcagtttgcgcaagttgaa
cattcaaaggcagcacagatagccttaaacggaaaattggagattgctggaaggacaatc
aaggtttcctctgtagctgatcatattggcacacaagacggtaatccaaaatcagctgat
tttgatgatgatgatggaggaggcctggctttaaatgcacaatcgagggtcctacttatg
cagaagctggatcgtacaggtctcgcagcaagtattggagtaccatcgctaaatggaaca
gctattaatcaaccaggcatgaatcctggtttccccacatcagtgcttccgacaacagca
ctcccttctgttgtcacagagcctattggtcagccaagtgaatgccttctactgaagaat
atgtttgatcctgcaactgagacggaactgaattttgatgaagacattaaagaagacgtt
ggcgatgaatgctccaagtatggcgaagtcaaggatatttatgtagacaagaacagcgca
ggttttgtgtatctgcggtttgaatcagtgcaggcggcaatggcagctcaaagagccatg
cacacgagatggtttgcgcaaaagatgatatctgcaactttcttgcctccacatgaatat
gaagccagagccaagccttga
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