Brassica rapa (field mustard): 103851073
Help
Entry
103851073 CDS
T03449
Name
(RefSeq) cellulose synthase-like protein D2
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103851073
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103851073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
103851073
NCBI-ProteinID:
XP_009126147
UniProt:
A0A398AE72
LinkDB
All DBs
Position
A02:3194105..3200389
Genome browser
AA seq
1140 aa
AA seq
DB search
MASNKHFSKIPSNLSNNSDATDPPRPYVPNTVTFARRTNSGRYVNYSRDDLDSEIGSVDF
NNYTVHMPPTPDNQTTDPSISQKVEEQYVSNSMFTGGFNSTTKAHLMDKVIETETNHPQM
AGAKGSSCAIPGCDAKVMTDGRGQDLLPCECDFKICRDCFVDAVKTGGGICPGCKEPYKN
TDMTDQGDQQRLPGGEGGGSKMERRLSLMKSNNKSAMVRSQTGDFDQNQWLFETSGTYGY
GNAFWTKDGNFGSGKDGDGDGMETQDLMSKPWKPLTRKLNIPAAVLSPYRLLILIRVVVL
ALFLSWRIKHQNQDAIWLWGMSVVCELWFAFSWLLDQLPKLCPVNRSTDLQVLKEKFETP
TPSNPTGKSDLPGLDVFVSTADPEKEPPLVTANTILSILAADYPCEKLACYVSDDGGALL
TFEAMAEAASFANIWVPFCRKHTIEPRNPDSYFSLKRDPYKNKVKPDFVKDRRRVKREYD
EFKVRINSLPDSIRRRSDAYHAREEIKAMKMQRQNRDDELLEPVKIKKATWMADGTHWPG
TWLTSASDHAKGDHAGIIQVMLKPPSDEPLHGDSEGFIDLNDVDIRLPLLVYVSREKRPG
YDHNKKAGAMNALVRASAVMSNGAFILNLDCDHYIYNSEAMREGMCFMMDRGGDRLCYVQ
FPQRFEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRIALYGFDPPRSRER
SSGCCGCCFPRGKKKKNHIPEENIALRMGEYDDEEMSLYLVPKKFGNSTFLLDSIPVAEF
QGRPLADHPSVKNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSV
TEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL
LASPKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIIS
ITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGVEISFTLTTK
SGGDDVDDEFADLYMVKWTSLMIPPITIMMVNLIAIAVGFSRTIYAVVPQWSKLIGGVFF
SFWVLAHLYPFAKGLMGRRGRTPTIVYVWAGLIAITISLLWVAINPPAGNTEIGGSFSFP
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaataaacatttcagtaaaattccatcgaacctatcaaacaactccgatgcc
accgatccaccaagaccttacgttcccaacacagtcacattcgctagaagaaccaactcc
ggccgctatgtcaactactccagagacgacctcgacagcgaaattggcagcgtggacttc
aacaactacaccgtccacatgcctccgacgccagacaaccagacaacggacccttccata
tcccaaaaagtcgaagagcagtacgtctccaactccatgttcaccggaggattcaacagc
accaccaaggctcacctcatggacaaagtgatcgaaaccgagaccaaccacccgcagatg
gctggcgctaaaggatcctcctgcgccatccctggctgtgatgctaaggtgatgaccgac
gggagaggccaagaccttctcccttgtgaatgtgacttcaaaatctgtagagactgcttc
gtggatgcggttaagacgggtggtgggatctgccccgggtgtaaagagccgtacaagaac
acggatatgaccgaccagggtgatcagcagaggcttcccgggggcgagggcggcgggtcg
aagatggagaggagactgtcgttgatgaagtcgaataataagtcggctatggtgaggagt
cagaccggagattttgatcagaaccagtggctgtttgagaccagtgggacttatggttat
gggaatgcgttttggacgaaggatgggaactttgggagcggtaaggatggagatggtgat
ggtatggagactcaagatttgatgagcaagccttggaagccacttactaggaagctgaat
attcctgctgctgttcttagtccatacaggcttttgatattgatccgtgtggttgtactt
gcattgttcttgtcttggaggataaagcatcaaaaccaagatgctatatggttatgggga
atgtctgtagtttgcgagctttggttcgccttctcttggcttcttgatcagctccctaag
ctatgccccgttaaccgttccactgatctccaagtccttaaggagaagttcgaaacccca
acaccaagcaacccgacaggaaagtcagaccttcctggtctcgatgtgtttgtctctaca
gcagatcccgagaaagaacctcctctggtcactgccaacaccattttatcgatcctagct
gctgattatccttgtgagaagcttgcttgctacgtatcagatgatggaggagcgcttcta
acgtttgaagccatggctgaagctgctagctttgcaaacatttgggttcctttctgtcgt
aaacacacgatagagccgaggaatcctgactcttactttagcttaaagagagatccttac
aagaacaaagtgaaacctgacttcgtcaaggataggagacgtgttaagcgtgagtacgat
gagttcaaagtcaggattaacagcttgcctgactccatcaggagacgttctgatgcttat
cacgctagagaagagattaaagccatgaagatgcagaggcagaacagagacgatgagctt
ttggagcctgttaagattaagaaagctacgtggatggctgatggtactcactggcctgga
acttggttgacttctgctagtgaccacgccaaaggtgaccacgctggtatcattcaggtg
atgttgaagccacctagtgatgagccactacatggagactccgaaggttttattgatcta
aacgatgtggacattcgtctccctctccttgtttatgtctcccgtgagaaacgtcctggc
tatgatcacaacaagaaggcaggagccatgaacgcactagtaagagcttctgccgtcatg
tcaaacggagcattcatactcaatctcgactgtgaccattacatatacaactccgaggca
atgcgagaaggtatgtgcttcatgatggaccgaggaggcgaccgtctctgctacgtccag
ttcccgcaacggttcgaaggtatcgacccctctgatcgatacgctaaccacaacactgtc
ttctttgatgtcaacatgagagctctcgatgggcttatgggcccggtttacgtcggaacc
ggttgtctcttcaggagaatagctctttacgggttcgacccgcctcggtccagagaacgt
tcctctggctgctgcggttgttgtttccctcgtggtaagaagaagaagaatcacatccct
gaggagaacatagctctgcggatgggtgagtatgatgacgaggagatgagtctttactta
gtccccaaaaagttcggtaactcgacgttcctcctcgactccatccccgttgctgagttc
caaggcaggcctttggcggaccacccgtctgtaaaaaacgggcggccgcccggcgcgctc
acgattcctcgtgagcttctggacgcgtccactgtagccgaagctatcgctgttatctcg
tgctggtacgaggataagaccgagtgggggtcccgtatcggctggatctacgggtcggtc
acggaagacgttgtgacggggtacagaatgcataaccgtgggtggaagtcagtttactgc
gtgacgaagcgggatgccttcagaggcacggcacctattaacttgacggataggcttcac
caggttctccgttgggctactggatctgttgagatcttcttttcgcgtaacaatgcgctt
ctcgctagccctaagatgaagatcctccagagaatcgcttacttaaacgtcggtatctac
ccgtttacatcgatctttcttatcgtatactgtttcctccctgctctgtctctcttctct
ggtcagttcattgtccagacgcttaatgtcacgttcctcgtctaccttctcatcatctcc
atcactctctgcttactcgccttgctggagatcaaatggtcggggatttcactagaagag
tggtggagaaacgaacagttttggctcattggtggaacaagtgctcatctcgcagctgtt
cttcaaggcttgctcaaagtcatagctggagttgagatctcattcactctcactaccaag
tcaggaggagatgacgtggacgacgagtttgcggatttgtacatggtcaaatggacttcg
cttatgatccctcctataacgatcatgatggtgaacttgatcgctattgcggtgggattc
agcaggacgatttacgctgtggttcctcagtggagtaagttgataggaggagtgttcttt
agcttctgggtgttggctcatctttatccttttgctaaagggttgatgggaaggagaggg
agaacgccgacgattgtttatgtgtgggctggtcttattgctattacgatctctcttctt
tgggttgctattaatccaccggctggtaatactgagatcggagggtctttcagttttcca
tga
DBGET
integrated database retrieval system
