Brassica rapa (field mustard): 103851106
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Entry
103851106 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 7 [UDP-forming]
KO
K10999
cellulose synthase A [EC:
2.4.1.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103851106
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.12 cellulose synthase (UDP-forming)
103851106
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103851106
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-UDP
Glyco_trans_2_3
zf-RING_4
Prok-RING_1
FYVE_2
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
103851106
NCBI-ProteinID:
XP_009126184
LinkDB
All DBs
Position
A02:complement(3310043..3315658)
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AA seq
1072 aa
AA seq
DB search
METMQQTTYHTEREKLKKGFLIFTDKRLVLHILNVLVSVLSSLTAADMEASAGLVAGSHN
RNELVVIHNHEEPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR
EGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDDIEHEFNIDDEHNKQNHSAESMLYGKMS
YGRGPDDDENGRFPPVIAGGHSRHVSGEFPAGGEHGLHKRVHPYPSSEAGSERWDDKKEG
GWRERMDDWKLQQGNLGPEPDDDPDMGLIDEARQPLSRKVPIASSKINPYRMVIVARLVI
LAVFLRYRLLNPVHDALGLWLTSVICEIWFAVSWILDQFPKWFPIDRETYLDRLSLRYER
EGEPNMLAPVDVFVSTVDPMKEPPLVTSNTVLSILAMDYPVDKISCYVSDDGASMLTFDS
LAETAEFARKWVPFCKKFSIEPRAPEMYFTLKIDYLKDKVQPTFVKERRAMKREYEEFKV
RINALVAKASKVPLEGWIMPDGTPXPGNNTKDHPGMIQVFLGSNGGFDVEGHELPRLVYV
SREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNCKAVREAMCFLMDPQI
GKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKALDGIQGPVYVGTGCVFKRQALYGY
EPPKGPKRPKMISCGCCPCFGRRRKSKHESNGDIAGAEGDKEHLMSEMNFEQKFGQSSIF
VTSTLMEDGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMH
CRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKW
LERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFIALFGSIIATGI
LELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFG
ELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPF
LKGLMGRQNRTPTIVVIWSILLASIFSLLWVRIDPFVMKTKGPDTSMCGINC
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagactatgcaacaaactacgtaccatacagagagagagaaacttaaaaagggtttc
ctcatcttcactgataaaagacttgttcttcatatactgaatgtcctagtttcggttttg
tcctctctcactgccgctgatatggaagccagcgccggtcttgttgccggttcgcataac
cgtaacgagcttgttgtcattcacaaccacgaagagccgaagcctctgaagaatctggat
ggacaattctgtgagatatgtggagatcagattgggttaacagtagagggagacctgttc
gtagcttgcaacgagtgtggttttccagcgtgcaggccatgctacgagtacgagagaaga
gaagggacacagaactgtcctcagtgcaagactcgttacaagcgtctcagaggaagccca
agagtggaaggagatgaggatgaagaggatattgatgatattgagcacgagtttaatatc
gatgatgaacataacaagcagaatcattctgctgagtccatgctctatgggaaaatgagc
tatggaagaggtcctgatgatgatgagaacgggagattcccacctgttatagccggtggc
catagtagacatgtaagtggagagttcccagctggaggagagcatgggcttcataagcgt
gtgcacccatatccatcatctgaagctgggagtgagagatgggatgataagaaggaggga
ggatggcgagaaagaatggatgactggaagctccagcaaggaaaccttggtccagaacca
gatgatgatcctgacatgggactgatagacgaggcaaggcagccactctcgcggaaagtt
cccatagcatcaagcaagatcaatccatataggatggtcatagttgctaggcttgtgatt
ctagcagtttttctacgttataggctcttgaaccctgtgcatgatgctctggggttatgg
ctaacctctgtgatatgtgaaatatggtttgccgtctcttggattcttgatcagttcccc
aagtggttccctatcgaccgtgagacctatctagaccgtctctccctcagatacgagaga
gaaggtgaaccaaacatgcttgcccctgtagatgtctttgtaagtacagtggacccaatg
aaggagcctcccttagtcacatccaacacagtcctatcaatcttggccatggactaccct
gttgataaaatctcctgctacgtctctgacgatggtgcttccatgctcacattcgactct
ctagcagaaacagccgagtttgcaagaaaatgggttcccttctgcaagaaattctccata
gagccacgtgctccggagatgtacttcacgttgaaaattgattatctcaaggataaagtc
cagccaacgttcgttaaagaacgtagagccatgaagagagagtatgaggagttcaaggtg
aggatcaatgctcttgtggctaaagcctcaaaggttcctctagaaggttggatcatgcca
gatggaacaccantgccagggaacaacactaaggaccatcccggtatgatccaagtcttc
ctcggcagcaacggtggatttgatgttgaaggccatgagcttcctcgccttgtgtacgtg
tcacgtgagaagcggcctggttttcagcaccacaagaaagctggtgccatgaacgctctg
gttagagtagcgggagtactcacaaatgcacctttcatgctgaacttggactgtgatcac
tacgttaacaactgcaaggccgtgagggaagcaatgtgttttttgatggatcctcagatt
ggaaagaaggtttgctacgtgcagttccctcaaaggttcgatggtattgacaggcatgat
cgttacgccaacagaaacactgtcttctttgatatcaatatgaaagctctagatggaatc
caaggtccagtttacgttggtactggttgtgttttcaaacgacaagctctgtatggttat
gaaccaccaaagggtcctaaacgtcctaagatgataagctgtggttgttgtccttgtttt
ggtcgccggagaaagtccaagcatgagtctaatggcgacatagcaggagcagagggtgac
aaggagcatttgatgtctgagatgaactttgagcaaaagtttgggcaatcatccatcttt
gtaacctcaactttgatggaagatggtggtgttcctccatcatcaagtcctgcagtgcta
cttaaagaggctattcatgtcataagctgtggttatgaagacaagactgagtggggaact
gagctgggttggatctatggctcaatcactgaggatattttgaccggtttcaagatgcat
tgccgtggctggagatctatttactgcatgcctaagagagctgcattcaaaggctcagct
cctattaatctatcagacaggttaaaccaggttttgcgttgggcacttggatccgttgaa
atctttttcagccggcacagtcctctttggtacggctacaaaggaggcaaactcaaatgg
cttgaacgttttgcttatgctaacacaacaatctacccttttacatctattccactcctt
gcctactgtattcttccagctatctgtctccttaccgacaagttcatcatgccaccgata
agcacgtttgctagtctcttcttcattgcattgtttggttccatcattgcaacgggaatc
ttggagctgagatggagtggagtgagcattgaggagtggtggagaaacgagcagttctgg
gtcattggaggaatctcagctcatctctttgcggttgtccaaggactcctcaagatctta
gcaggcattgacacaaacttcacagtcacgtcaaaggcaacggatgacgacgactttgga
gagctttacgctttcaaatggacaactctgcttatccctccgacaacggttctgatcata
aacattgttggagttgttgcaggcatctcggatgctatcaacaatgggtatcagtcttgg
ggacctctgtttggtaaactcttcttctcattttgggtcattgttcatctctacccgttc
cttaaaggtttgatggggagacagaacagaacgccgacgattgtggtaatttggtcgatt
ttgttggcttctatcttctctttgctttgggtgaggattgatcctttcgtgatgaagact
aaaggacctgacacttccatgtgtggcattaactgctga
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