Brassica rapa (field mustard): 103851629
Help
Entry
103851629 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103851629
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103851629
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103851629
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103851629
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103851629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103851629
NCBI-ProteinID:
XP_009126746
UniProt:
M4D486
LinkDB
All DBs
Position
A01:2998495..3001750
Genome browser
AA seq
612 aa
AA seq
DB search
MHEVGFPLDLSVLTRLIPSLFFLAVGVFYFLRNTAAKYFDIGAAAAGGFDRELVAEDCTT
KCSRCNSVRYCSEECQTSDWSSGHQRRCREIGITTLTPSARNSLRFRASRFGDCPERDQN
KINFKPREVLFPYEEFVRYFNWDNTDLAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLE
RGHRSECMRDDWCFFCAFQTHVERASQSRYPFSPVNIISRLTNIGGTLGYGRQEDAHEFM
RYAIDTMQSVCLDEFGGEKMVPPRCQETTLVQYIFGGVLQSQVQCTVCNNVSEQYENMMD
LTVEIHGDAVSLEECLDQFTAREWLQGDNMYKCDRCSDYVKACKRLTIRRPPNVLTIALK
RFKGGRYGKLNKRISFPETLDLRPYMSQGGEGSDVYTLYAVIVHLDMLNASFFGHYICYI
KDFSGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSPLPCATLGSQVQEEKETDTL
ATKPCQKELVESSMVEAIDTSSCSSHAASEDLECEQESSSSLSSSISSPSSPSVVTSESC
TVDGLDSDSNPWIDDDSAIDHQESVVTNGNIDGEVKNHAVGSCSDVTASVPSSCSKPRHP
VRDTDTKMIGAQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggttggctttccgctggatctctctgtcctcactcgcctgataccgtctctc
ttcttcctcgccgtcggtgtcttttacttcctcagaaacaccgccgctaagtacttcgac
atcggcgccgccgccgccggaggtttcgacagggaactcgtggcggaggattgcaccacg
aaatgctctcgctgcaattccgttcgatactgctcagaagagtgtcaaacgtcagattgg
agttcaggtcatcaaagaaggtgcagggagattgggattactaccttaacaccatctgcc
agaaacagccttaggttcagagcttcaaggtttggggattgtccggagcgagaccaaaac
aagatcaacttcaagccaagagaagttcttttcccatatgaggagtttgttagatacttt
aactgggacaatacagatttggctccctgtgggctcatgaattgtggaaacagttgtttt
gcgaatgtgattctacaatgcctatcatggacacgtcctcttgttgcatacctactagag
agaggccataggagtgaatgtatgcgtgacgattggtgcttcttctgtgcatttcaaacc
catgtcgagagagcgagccaaagccggtaccctttttcaccggtgaacattatctcacgg
ctaactaacatcggtggaactcttgggtatgggagacaagaagatgctcatgagttcatg
aggtacgcgattgatacgatgcagtccgtttgcctagacgagttcggtggagaaaaaatg
gtgcctcctcgctgtcaagaaacaacacttgttcagtatatattcggcggtgtcctccag
tcacaggttcagtgtactgtctgcaataatgtctctgagcaatacgagaatatgatggat
ttaacggttgaaattcatggagatgccgtgtctctggaggaatgcctcgatcagtttaca
gccagagagtggcttcagggcgataacatgtacaaatgtgataggtgtagtgactatgta
aaggcatgtaagcgtcttacgatcaggcgccctccaaatgttcttaccattgccttaaaa
agattcaagggaggaagatacgggaaactgaacaaaagaattagttttcctgaaacattg
gatcttagaccttacatgagccaaggcggagaaggatcagatgtgtacacactctatgca
gtgattgtccatctagacatgctgaatgcatccttcttcggccattacatatgctacatt
aaggactttagcggaaactggtatagaatagatgattccgagatagaaagtgtggaatta
gaagatgttctttctcaaagagcttatatgcttctctacagcaggattcaagctcggtca
ccattaccgtgtgcgactctcggatcacaagttcaagaggagaaggaaacagacacattg
gctacaaaaccttgccaaaaagagttagttgagagttcaatggtggaagctattgacacc
agtagctgcagcagccatgccgccagtgaagaccttgaatgtgaacaagaatcatcatcc
tcgttgtcatcatcaatttcatcaccttcgtcaccatctgtagtgacctctgaatcttgc
acggttgatggattggattctgactcaaacccttggattgatgatgactctgcaatagat
catcaagagtctgttgtaacaaatgggaacatagatggagaggtaaaaaaccatgccgtc
ggttcttgttcagacgttacagcttcagttccatcgagttgttcaaaaccccgacatcct
gtgagagatacagacaccaagatgatcggtgctcaatga
DBGET
integrated database retrieval system
