Brassica rapa (field mustard): 103851982
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Entry
103851982 CDS
T03449
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103851982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103851982
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103851982
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103851982
NCBI-ProteinID:
XP_009127107
UniProt:
M4E1Q2
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Position
A02:7228716..7233327
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AA seq
695 aa
AA seq
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MATEQEFTRASRVSGASSSVGYYSDEDYKDEEEEEEEEEEEMEETEKDEEEEEPRVRVTC
GGRRNGSPGSYNKWMMLGRILDPRSKLVQEWNRVFLLVCATGLFVDPLFLYTLSVNDACM
CLLVDGWLALTVTALRSMTDLLHLWNILIQFKIARWWPYRGGDSDGDINKGDGTRVRMRG
APPYVKKNGFFFDLFVILPLPQVVLWVVIPSLLKRGSVTLVVSILLLTFLFQYLPKIYHS
IRHLRQNATLSGYIFGTVWWGFALNMVAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTM
GCDLRMLSCKEPVYYGTTEMVLDRARLAWARNHQARSVCLDIDTDYTYGAYQWTIQLVSN
ESRLEKVLFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHA
TTSKKQAMHLKMRNIEWWMKKRHLPLGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLR
RDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRG
HLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLD
AQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRP
RRPLSRCASLGEDKLRLYTAILTSPKPNPDDFDDY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagcaagaattcacacgcgcatcacgcgtctcaggtgcttcaagcagcgta
ggatattactcagacgaagattacaaggacgaggaagaggaggaagaagaagaagaagaa
gagatggaagaaactgagaaagatgaagaagaagaagaaccacgtgtgcgggttacgtgc
ggaggaagaagaaacgggtcaccaggttcctataataaatggatgatgttgggtcgaata
cttgacccgagatccaaactggttcaagaatggaacagagtctttctcctcgtctgcgcg
acgggccttttcgtggacccactttttctatacaccctctcggtaaacgacgcgtgtatg
tgtctgctcgtcgacggttggctcgctctcaccgtcactgcgttacgctccatgaccgat
cttttgcacttatggaacattttgattcagttcaagattgctcgttggtggccttatcgc
ggcggagatagcgacggcgatattaacaaaggagatgggacacgtgtacgtatgagaggt
gctccaccttacgttaagaagaatgggttcttcttcgatctcttcgtcatcttaccatta
cctcaggtggtgttgtgggtggtgataccttctcttctaaagagaggatctgtgactttg
gtggtctcaatcttgcttttaacattcctcttccaatatctaccgaagatctaccactcc
attcgccatctccgtcaaaatgccactctgtcaggttacattttcggtaccgtctggtgg
ggattcgcactcaacatggtcgcttatttcgtcgccgctcatgcagcaggagcctgttgg
tacttgttaggggtccaaagatcagcgaaatgtcttaaagaacaatgtgaaaacacaatg
ggttgcgacctaaggatgttgtcatgtaaggaaccagtgtactatggcacgaccgagatg
gtccttgacagggctagactggcttgggcacgaaaccaccaagcacgatccgtttgctta
gatatcgacaccgactacacatatggtgcttatcaatggaccattcaacttgtgagcaat
gaaagccggttggagaaagtccttttccctattttttggggtctcatgactctcagcaca
tttgggaatttggagagcacaacagaatggtctgaggttgtcttcaatataatagttcta
acaagtggtcttcttcttgttacaatgttgatcggtaacataaaggtgtttcttcacgca
acaacttcaaagaagcaagcaatgcacctgaaaatgaggaacatagagtggtggatgaag
aagagacatttaccattagggtttaggcaacgagttcgcaactacgagcggcagagatgg
gccgctatgcgcggtgtagacgagtgtgagatggttcaaaaccttccagaaggtcttagg
agagacatcaagtaccatctttgtttggacttggtccggcaggttccgttgtttcagcat
atggatgatttggtgcttgagaatatatgcgaccgcgtgaagtctctcattttcacaaaa
ggagaaaccatccaaaaagaaggagatgcagtgcagagaatgttgtttgtagtaagaggc
catcttcagagtagtcagttactaagagacggagtcaaaagctgttgcatgttaggtcca
ggtaattttagcggtgacgagcttctctcatggtgtctccgacgaccattcgtggagagg
ctaccgccgtcttcctcaacgcttgtaacgctcgagaccaccgaagcatttggactcgac
gctcaagacgttaagtacgtgactcaacatttccgttacacttttgttaacgagaaagtc
aaacgcagtgcccgctattattctcctggctggcgaacttgggccgcagttgcggttcag
ctcgcttggaggaggtacaagcataggttgactttgacgtcactgtcgttcataaggccg
aggagaccattgtcgagatgtgcgtcactaggagaagataaattgaggctctatacagcc
atcttaacctctcctaaacccaatcctgacgattttgatgattattaa
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