Brassica rapa (field mustard): 103852096
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Entry
103852096 CDS
T03449
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103852096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103852096
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
103852096
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
DUF6855
Motif
Other DBs
NCBI-GeneID:
103852096
NCBI-ProteinID:
XP_009127237
UniProt:
M4E1E7
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All DBs
Position
A02:complement(7987587..7991526)
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AA seq
291 aa
AA seq
DB search
MRSPLRGRGRGEGSAMRGGGRGPRGRGPRGRVPGGRGPRSGPGGMKGGNKVIVTPHRHEG
VFIGKGKDEVILTKNLVPGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAIFGGLDD
IWIKPGAKVLYLGAASGTSVSHVSDIVGPEGCVYAVEFSPRSGRDLVNMAKKRRNVVPII
EDARHPAKYRMLVSMVDVIFADVAQPDQARIVGLNASFFLKAGGHYMISIKAKCIDATMP
AETVFSNEVKKLQADELKPAEQITLEPYERDHACVVGGYRMPKKQKTATAS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagatctcccctaagaggacgtggaagaggtgaaggaagtgccatgagaggcggtgga
agaggtcccagaggaagaggtcccagaggaagagtgcccggaggaagaggccctagaagt
gggcccggaggaatgaagggaggaaacaaagtgatagtgactcctcacagacatgaagga
gtgttcattggtaagggtaaagatgaagttattctcactaagaacttggttcctggtgaa
tccgtttacaatgagaagagaatctctgtgcagaacgaagatggaactaaggttgaatac
agagtttggaaccctttccgttctaagctagctgccgcaatttttggtggtcttgatgac
atttggatcaaacctggcgctaaagttctttaccttggtgctgcctctggaacctctgta
tctcatgtctctgatattgttggacctgagggatgtgtttatgccgttgagttttctcca
agaagtggaagagatttggtgaacatggcaaagaagagacgtaatgtggttccaatcatt
gaagatgctagacatcctgctaaatacagaatgcttgtgagcatggttgatgtcatattc
gctgatgttgctcaaccagatcaggctaggatagtaggtctcaatgcatctttctttctc
aaagctggaggtcactatatgatctcaataaaggcgaaatgtatagacgcaacaatgcca
gcagaaacggtattttcaaacgaagtgaagaagctacaagcggacgagttgaaaccagca
gagcagattactcttgagccttatgagcgtgaccatgcttgtgttgttggtggatatcgc
atgcctaaaaagcagaaaactgctactgcttcttaa
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