Brassica rapa (field mustard): 103852186
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Entry
103852186 CDS
T03449
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
brp03012
]
103852186
Translation factors [BR:
brp03012
]
Eukaryotic type
Initiation factors
eIF-3
103852186
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Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
DUF2779
Sigma70_r4
MJ1674_2nd
RE_BanI
Motif
Other DBs
NCBI-GeneID:
103852186
NCBI-ProteinID:
XP_009127351
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Position
A2
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AA seq
894 aa
AA seq
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MSRFFAQGGSDSEDESDIEEEILEDQNNDINNRYLQDNSDDDDDTDTKRVIKPTKDKRFE
EMTHTVEQMKNAMKINDWVSLQENFDKVNKQLEKVMRITEAVKPPSLYIKTLVMLEDFLN
EALANKEAKKKMSPSNSKALNAMRQKLKKNNKLYEEDINKYREAPEVEEENELEDEDDED
EEDEDEEDDDSKEAVTDEEVDDTTDTRWETMLNKKDKQMEKLLSKDPKEITWDWVNQKFK
EIMAARGRKGTARFDLVDQLTHLTKIAKTPAQKLEILFSVISAQFDVNPGLSGHMPIKVW
KKCVLNMLTILDILVKYNNIVVDDTIEPDENETSKPADYDGTIRVWGNLVAFIERIDTEF
FKSLQSIDPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALRRVESIYYKPQ
EVYEAMRKLAELVEEEEEAEDAEEESGPISSFIVVPEVVPRTPTFPESGRAMMDILVSLI
YRNGDERTKARAMLCDIYHHALMDNFGTARDLLLMSHLQDNIQHMDISTQILFNRTMAQL
GLCAFRVGMITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERLERRRQMPYHMH
INLELLEAVHLIGAMLLEVPNMAANSLEARRRVISKNFRRLLEISERQAFNAPPENVRDH
VMAATRALTKGDFQTAFEVLNSLEVWRMLKNRDSILEMVKARIKEEALRTYLFTYSSSYE
SLSLEQLAKMFDVTEAQVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAFQLT
EKLSVLAESNERAMEARTGGGGLDLSSRRRDNNQDYAGAASGGGRWQDNNMNSGYGGRQG
NNRSGYGGRPGQPRDWSGQNRGGGYAARAGSGNRGGMQMDGSTRMVSLNRGVRA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttttcgctcagggtggtagtgacagcgaggatgagagtgatatcgaggaa
gagatcctggaggatcagaacaacgacatcaacaaccgttaccttcaagataacagcgac
gacgacgacgacactgataccaaacgtgtcatcaagccaaccaaagacaagcgtttcgag
gagatgacgcacaccgttgagcagatgaagaacgctatgaagatcaacgattgggtcagc
ctccaggagaatttcgacaaggtcaacaaacagcttgagaaagttatgaggatcaccgag
gctgtcaagcctccttccttgtacatcaaaacgcttgtcatgttggaggatttcttgaac
gaggccttggctaataaggaagccaagaagaagatgagtcctagcaactccaaggccttg
aacgctatgaggcagaagctcaagaagaacaataagctgtacgaggaggatattaataag
tacagggaggctccggaggttgaggaggagaatgagctggaagatgaggatgatgaggat
gaggaagacgaggatgaggaagacgatgatagcaaagaggctgtgactgacgaggaggtg
gatgatactactgatactcgctgggagactatgcttaacaagaaagataagcagatggag
aagctccttagtaaagatcctaaggagatcacttgggactgggtcaaccagaagtttaaa
gagattatggctgctcgtgggaggaaggggactgctcgttttgaccttgttgatcagctt
acacacttgaccaagatcgccaagactcctgctcagaagctcgaaatcttgtttagcgtt
atctcagcacagtttgatgtgaatccaggtctcagcggacacatgcctatcaaggtctgg
aagaaatgcgtgctcaacatgctcaccatactggacatccttgtcaagtacaataacatt
gttgtggatgatacaattgagcctgatgagaatgaaacttccaagccagcagattatgat
ggaacaatcagggtctggggaaatttggttgcgttcattgagaggattgacactgagttt
ttcaagagcttgcagtcaattgatcctcacacccgtgagtatgttgagagactgagggat
gagcccatgttcttggcccttgctcagaacatccaggactactttgagcggatgggtgat
ttcaaagctgctgcaaaggtagccctgagacgagttgagtcaatatactacaagccccag
gaagtttatgaggctatgaggaagctggctgagttggttgaagaagaggaagaagctgag
gatgccgaggaggaaagtggacctatttcttcattcattgttgttccagaggttgttccc
cgtacgcctaccttcccagagagcggccgagcaatgatggatattctcgtgtcccttatc
tacagaaatggagatgagaggaccaaagcccgtgcaatgttatgtgatatctatcaccat
gcattgatggacaactttgggactgcgagagacttgttgctaatgagtcatctccaagac
aacattcagcacatggacatctcaacacagatcctctttaacaggaccatggcgcagctt
ggcctttgtgctttccgtgttggaatgatcactgaatcccatagctgcctctcggagctg
tactctggtcaaagagtgagggagttgcttgcccaaggtgtctcgcaaagtcgataccat
gagaagacacccgaacaggaaaggttggagaggaggagacaaatgccataccacatgcac
ataaacctcgagcttctggaggctgttcatctcatcggcgctatgctacttgaagtacca
aacatggcagcaaactcgcttgaagccagacgtagagtgatcagcaagaacttccgtcgc
ctgcttgagatcagcgagaggcaagcgttcaatgcaccacctgagaatgtacgtgatcac
gtcatggcagccaccagagccctgaccaaaggagatttccagaccgcgtttgaggttctg
aactctcttgaggtctggagaatgctcaagaaccgtgacagcatcctcgaaatggtcaaa
gctaggatcaaagaagaagctctaaggacttacctattcacatactcgagctcctacgag
tccctaagccttgaacagctggctaagatgtttgatgtcaccgaagcacaggttcacagc
attgtgagcaagatgatgatcaacgaagagcttcacgcaagctgggaccagccaacacga
tgcatagtcttccatgaagtgcaacacagcagattacagtcgttggctttccagttaacc
gagaaactttcggttttggctgaaagtaatgaaagggcaatggaagcaagaaccggtgga
ggtggtcttgatctgagctcaaggaggagggacaacaatcaggactatgcaggagcagca
tcaggtggtgggagatggcaggacaacaacatgaattctggatatggaggaagacaaggt
aacaacagatctggatatggaggaagaccaggacagcctagagactggtcgggccagaac
cgaggtggaggatatgcagcaagagctggctcaggaaacagaggtggtatgcaaatggat
ggctcaactcgtatggtgagtcttaaccgaggtgttcgcgcttag
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