KEGG   Brassica rapa (field mustard): 103853226
Entry
103853226         CDS       T03449                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103853226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103853226
   03036 Chromosome and associated proteins [BR:brp03036]
    103853226
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103853226
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103853226
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_RSE1_2nd WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_LRRK2 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 103853226
NCBI-ProteinID: XP_009128399
UniProt: A0A398ABW5
LinkDB
Position
A02:15409632..15412559
AA seq 346 aa
MATFGATANTNPNKSFEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLA
SAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIVDMAW
IPGMNLLVTGSWDKTLRYWDTRQQTPVHTQQLPDKCYALSVKHPLMVVGTADRNLIVFNL
QNPQTEFKRIVSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCHRD
GNEIYSVNALNFHPVQGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSSFNHDGSI
YAYASCYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVTTGRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggctacctttggtgcgacggcgaatactaatcctaacaaatcctttgaggttactcca
tcacccgcagattctatctccagcttaagttttagcccaagagccgatattcttgtcgcc
acctcttgggacaatcaggtgcggtgttgggaaatatcccgtagtggagcctctctagca
agtgctcctaaagcatctatatctcatgatcagccggtcttgtgctctgcttggaaagat
gatggaaccactgtctttagtggaggttgtgataagcaagccaaaatgtggcccttgttg
tccggcggtcaacctgttactgttgctatgcacgatgctcctattgttgacatggcctgg
atccctggaatgaatctccttgttactggaagctgggataaaacattgagatattgggac
acaaggcagcaaactcctgtgcatacccaacagcttccagataaatgctatgctttgtct
gtgaaacaccctctgatggttgtcggaactgcagataggaatcttattgtcttcaacttg
caaaatcctcagactgagttcaagagaatcgtgtcaccactgaagtaccagacgaggtgt
gttactgccttccctgatcagcaaggatttttggttggttcaattgaaggacgagttggt
gtccatcatttggatgattctcaacagaacaagaacttcacattcaaatgccacagagat
gggaatgagatctattctgtcaacgctctgaacttccacccggtacaaggaacttttgcc
actgctggctcagatggggctttcaatttctgggacaaggatagtaaacaaagactcaag
gccatgtcaaggtgcagtcagccaattccttgcagttcgtttaaccacgacgggtcgata
tatgcatatgcgtcgtgctatgactggagcaaaggtgcagagaatcacaacccagcaact
gcgaaaagcagcatcttcttgcacctgccacaggaaagtgaggtcaaggcaaagccaaga
gtaacgaccggcaggaaatga

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