Brassica rapa (field mustard): 103853304
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Entry
103853304 CDS
T03449
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103853304
Transcription machinery [BR:
brp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103853304
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
103853304
NCBI-ProteinID:
XP_009128472
UniProt:
M4CWB6
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Position
A02:complement(15810094..15813077)
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AA seq
492 aa
AA seq
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MMATTAVVGLNAGKRLLSSSFYYSDVTEKFLSVNDLCSSQYYYHIASTRSGITAKKTSSS
SSSSNYSPSFHSSSRHTQSAKALKESVDVVQQWLPPGSDQELEEESHEYEDDDTVEALLL
LQRSLLEKQWNLSFEKKKKKILVTCSGTSARQRRMGAKKKTNIKVVNSDLFQNNRVKGGY
VKGVISDDVLSHAEVVRLSKKIKSGLRLDEHKSRLKDRLGCEPSDEQLAVSLKISRAELQ
AWLMECNLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFR
ISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGVTPSIDRIAESL
NMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNRLENNPWHGYDEWALKD
EVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAA
RKSKMEAMILKN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacaacagctgttgtaggactcaacgcagggaaaagactgttgagttcttcc
ttttactactccgacgtcaccgagaaatttctatctgtaaatgatctttgttcatcacag
tactactaccatattgcttcaacaagaagtggaataacggcgaaaaagacatcatcatca
tcatcatcatccaactacagtccgagctttcactcatcaagtcgtcacacacaatctgcc
aaggctcttaaggagagcgtggatgttgtgcagcaatggctacctcctggatctgatcag
gaattggaagaggaaagccacgagtacgaggatgatgataccgttgaggcactcttgttg
ctgcagaggtctttgttagaaaaacagtggaatctttcctttgagaagaagaagaagaag
attctggtgacgtgttcagggacttcagctcggcaaaggagaatgggtgctaagaagaaa
actaatattaaagtggttaattcagacttgttccaaaacaaccgtgtcaagggtggttat
gtgaagggtgtcataagtgacgatgttcttagtcacgctgaagtcgtgcgcttgtccaag
aaaatcaaatctggccttcgtcttgatgagcataagtcaagattgaaggatagattaggg
tgtgagccttctgatgaacagcttgcagtatccttgaagatatctcgtgccgagctgcag
gcatggttgatggaatgtaatctagctagggagaagttagctatgagcaacgttcgtttg
gttatgtctattgctcagcgttacgataatatgggagcagaaatgtctgaccttgttcag
ggtggtcttatcggacttttgcggggaatagagaaatttgattcttccaaaggtttcaga
atctcaacttatgtatactggtggattcgacagggtgtctcaagagcattagtggacaac
tcacgaacattgaggttgcctactcacctgcatgaaaggctaggtttaatcagaaacgca
aagcttagacttcaagagaaaggagtcacaccctccattgatcggattgcagagtcgcta
aacatgtctcagaagaaagttagaaatgcaacagaggctgtaagcaaaatattttccctg
gacagagatgcattcccttctttgaacggtctccctggagaaacccaccacagctacatt
gcggataatcgtttggagaacaatccgtggcacgggtacgatgagtgggcactcaaggat
gaagtgagcaagcttataagtgcaacacttggagaacgggaaagggaaattattaggtta
tactatggtctagacaaagaatgtctcacatgggaagacattagcaaacggataggacta
tcgagagagagggttagacaggtggggcttgtggcgctcgagaaactaaaacacgcagca
aggaagagtaaaatggaggcaatgatcctcaagaattga
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