Brassica rapa (field mustard): 103853626
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Entry
103853626 CDS
T03449
Name
(RefSeq) beta-amylase 8 isoform X1
KO
K01177
beta-amylase [EC:
3.2.1.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00500
Starch and sucrose metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
103853626
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.2 beta-amylase
103853626
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_14
BES1_N
YueH
Motif
Other DBs
NCBI-GeneID:
103853626
NCBI-ProteinID:
XP_009128781
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All DBs
Position
A02:21800360..21804166
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AA seq
715 aa
AA seq
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MDARLYIHKVQKILTCGKTTKRERETQRKKKTRRPKKMHSLNTTTTGSQDPIDPNRNPDP
DQYPHRNPSHPQSRRPRGFAATAAAASMGQADSDVNNGNITGETSSGGGGGKGKREREKE
KERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVDADGTTYRQ
SHQTNHVVQFPARSIDNPLSSSTLKNCAKAALECQQQHPSLRIDDNLSPVSLDSVVIAES
DHPGNGRYTGASPIPSVGCVDANQLIQDVHSTERRNDYTENFYVPVYAMLPVGVIDNFGQ
LVDPQGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKLKLQV
VMAFHEYGGNASGNVMISLPQWVLEIGKDNPDIFFTDREGRRSFECLNWSIDKERVLHGR
TGIEVYFDFMRSFRSEFDDLFVEGLIAGIEIGLGASGELKYPSFPERMGWIYPGIGEFQC
YDKYSQTSLLKEAKSRGFAFWGKGPENAGQYNSQPHETGFFQERGEYDSYYGRFFLNWYS
QLLIGHAENVLSLANLAFEETKIIVKIPAIYWSYKIASHAAELTAGYYNPSNRDGYSPVF
ETLKKYSVTVKFVCPGPQMSSNEHEEALADPEGLSWQVVNAAWDKGLLIGGENAITCFDR
GGCMRLIEMAKPRNHPDSNHFSFFTYRQPSPLVQGSTCFADLDYFIKRMHGDLQR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcgtttgtatattcataaagttcaaaaaatcctcacatgtggaaaaacaaca
aagagagagagagagacccaaaggaaaaaaaaaacacgacggccaaagaaaatgcactcg
ctaaacaccaccaccaccggttcacaagatccgatcgacccaaaccgaaaccccgacccg
gatcagtacccccaccgaaaccccagccatccccagtctcgacgcccccgcgggttcgcg
gcaactgctgcggcggcgtcgatgggtcaagccgacagcgatgtgaacaacggaaacata
accggagagacgagcagcggcggcggaggagggaaggggaagagagagagggagaaggag
aaagagagaacgaagcttagggaaagacacagacgagccatcactagtagaatgctcgcc
gggttgagacagtacggtaacttcccgttaccggcgcgtgcggatatgaacgatgtaatc
gctgctttggcgcgtgaagctggatggagcgttgacgccgacggtactacttaccgccag
tcacatcaaaccaaccatgtggttcagtttccggcgagatctattgataatcctctttct
tcaagtactttgaagaactgtgctaaggctgcacttgaatgtcagcagcagcatccttct
cttagaatcgacgacaacctttctcctgtctctcttgattccgttgttatcgccgagagt
gatcatcccgggaatggaaggtatacaggtgctagccctatcccttcagtgggatgcgtc
gatgccaatcagcttatacaagatgttcattccacagagcgccgtaatgactacacagag
aacttttatgtcccagtgtacgccatgcttcctgttggcgttatagacaacttcggccag
ttggttgatcctcaaggtgtaaggcaagaactaagctacatgaagtcattaaacgtcgat
ggagttgtaatagattgttggtgggggatagttgaaggctggaaccctcagaaatatgtg
tggtctggctacagagagctctttaaccttatcagagacttcaaactcaaactacaggtg
gtgatggcatttcatgaatatggagggaatgcatctggaaacgttatgatctcgttgcca
cagtgggttttggagattgggaaagacaatccagacatattcttcactgatcgtgaagga
agaaggagcttcgagtgtttgaattggagcattgacaaggaacgggtattgcatggacga
actggtatagaggtatattttgattttatgagaagcttccggtcagagttcgatgacctg
tttgtggagggtctaattgctggaatagagattggtcttggagcttctggtgaactaaag
tatccatctttccctgaaaggatgggttggatctatcctggtatcggtgagtttcagtgt
tatgacaagtattcacaaacgagtctgctaaaggaagcaaagtcgagggggttcgcgttc
tggggtaaaggaccagagaatgctggtcaatacaattcacaacctcatgaaactggtttc
ttccaggagagaggtgaatatgacagctactacggtcgcttcttcttgaactggtactct
caactactgataggacatgcagagaatgttctttctcttgccaatctcgcctttgaggag
acaaagattattgtcaagataccggcgatttactggtcatacaagatagctagtcacgct
gctgagctaactgcaggatactataacccttcaaaccgtgacgggtactctcctgttttc
gaaactctgaagaaatattcagtgacggttaagtttgtgtgccctgggccacaaatgtct
tctaatgagcatgaagaagctctagctgatccagaaggtttgagttggcaggtggtcaat
gcagcttgggataagggacttcttattgggggagagaatgcgattacttgttttgataga
ggaggttgtatgagattaatcgaaatggctaaaccaagaaaccatccagatagcaatcac
ttctccttcttcacttaccgccaaccttctcctctagttcaaggatccacttgctttgca
gatttagactacttcataaaacgcatgcacggtgatttacagagataa
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