Brassica rapa (field mustard): 103853668
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Entry
103853668 CDS
T03449
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103853668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103853668
04121 Ubiquitin system [BR:
brp04121
]
103853668
03029 Mitochondrial biogenesis [BR:
brp03029
]
103853668
Membrane trafficking [BR:
brp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103853668
Atg8 conjugation proteins
103853668
Ubiquitin system [BR:
brp04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
103853668
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103853668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
103853668
NCBI-ProteinID:
XP_009128826
UniProt:
M4DZQ2
LinkDB
All DBs
Position
A02:22249282..22252756
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AA seq
697 aa
AA seq
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MDDKRESPPTMILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYAPCSHPQVS
NHLTLLSESLPSSSDEQSSTESTSHGNRNKCPVPGTLYNTNTVESFTKLDKQSLLKSEAN
KIWEDIQSGKALEDCALLSRFLVISFADLKKWSFRYWFAFPALVLDPPASLVELKPASEY
FTSEEAESVSAACNEWRDSSLTTDVPFFLVSISSDDSKATIRHLKDWEACQGDHQKLLFG
FYDPCHLPSNPGWPLRNYLALIRSKWHLETVWFFCYRESRGFADMSLSLVGQASITLSSD
SSVPNSVGWELNKGKRAPRSISLANSMDPTRLAVSACDLNLKLMRWRALPSLDLNVLSSV
KCLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYTFEDCVGRGEFKAVA
AVKSLKQIFPAVESSGVVMAIPMPGHPISSQEEESVLGDCKRLRDLIESHDAVFLLTDTR
ESRWLPSLLCANANKIAINAALGFDSYMVMRHGAGPTSLTDDMQNLDMNKAGRQRLGCYF
CNDVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGIYAKGDNSSSSN
GGNTDESPLGILPHQIRGSVSQFSQITLLGQASNSCTACSETVVSEYREKGNSFVLEAIN
HPTYLEDLTGLTELKKAANSFSLDWEDDEDDDEAVDM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggacgataagagagaatctccaccgacgatgatacttcaattcgctccattgaacagc
tccgtcgacgaaggtttctggcacagcttttcctctttgaaactcgataaactcggaatc
gacgattctccgatctccatcaccggattctatgcaccgtgttctcatccgcaagtctca
aaccatctgactcttctttcggagtcattgccttcttcttcagatgaacagtcatctacc
gagagtactagtcatgggaataggaacaagtgtcctgttccagggactctctacaacacc
aacaccgtcgaaagctttactaaactcgacaaacaaagcttgttaaaatcagaagcaaac
aagatttgggaagatattcaatcgggaaaggctctcgaggactgtgctttgttatctagg
ttcctcgttatctcgtttgccgaccttaagaagtggagctttcgttattggtttgcgttc
cctgcacttgtgcttgatcctcctgcaagcttggttgagttaaagccagcttcggagtat
tttacttcagaagaagcagaatcagtatctgctgcttgtaatgagtggcgtgactcaagt
ttaacaactgatgttccattctttttggtttcgatttcttctgatgattcaaaagctacc
atcagacatcttaaagactgggaagcttgccaaggtgatcaccaaaagttacttttcggt
ttctatgacccgtgtcaccttcctagtaaccctggctggccacttcggaattatcttgca
cttattcgctcaaaatggcacctcgagactgtttggttcttctgctacagagagagccgc
ggtttcgctgacatgagcctttctcttgttggtcaagcctccattacactctcatctgat
tcatctgtacctaactcagtgggatgggagcttaacaaaggaaaacgagccccccgatcc
attagccttgctaactccatggatccaacaaggttggctgtttctgcttgtgatttaaac
ttgaagttaatgagatggcgtgcgttaccgtctctagacttaaacgttctgtcctctgtg
aagtgccttcttcttggagctggtacattgggttgtcaagttgctcgtactcttatgggt
tggggaatccgcaacataacctttgtagactatggcaaagtagctatgtctaatcctgtc
aggcaatctctgtacacgtttgaagactgtgtaggccgtggcgagttcaaagccgtagct
gctgttaaaagccttaaacagatctttccagctgtggaatctagtggagttgttatggct
ataccgatgcctggacatcccatctctagccaagaagaagagtctgttctcggtgattgc
aaacgccttcgtgatttgattgaatctcatgatgcagtgttcttgttgactgatacaaga
gaaagcaggtggttaccttctcttctttgtgctaatgctaataagattgctataaacgcg
gctttaggtttcgatagctacatggtaatgcgacatggcgctggccccacctcgttaact
gatgatatgcagaatcttgacatgaacaaggcaggaagacagagacttggttgttacttc
tgcaacgacgttgttgcacctcaagattcaatgactgatcgaacactggaccagcaatgc
actgttacacgcccggggttagctcccattgcaggagctctggccgttgaactcttagtc
ggagttctacaacatccacttggtatatatgcaaaaggagacaactcgagctcgagtaat
ggaggaaacaccgatgaatcacctctagggatcttacctcatcagattagaggctcagtt
tctcagttctcacagatcacactgctaggacaagcctccaacagctgcacagcttgttct
gaaactgtggtgtcagagtatcgagaaaaaggaaacagtttcgtacttgaagctattaac
catcctacatacctggaggatcttaccggtttaaccgagcttaagaaagctgctaattcg
tttagcctcgattgggaagacgatgaagacgacgatgaagctgtagatatgtaa
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