KEGG   Brassica rapa (field mustard): 103853691
Entry
103853691         CDS       T03449                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03420  Nucleotide excision repair
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103853691
  09124 Replication and repair
   03420 Nucleotide excision repair
    103853691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103853691
   03400 DNA repair and recombination proteins [BR:brp03400]
    103853691
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103853691
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     103853691
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103853691
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103853691
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103853691
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 103853691
NCBI-ProteinID: XP_009128848
UniProt: M4DZS6
LinkDB
Position
A02:complement(22553546..22558614)
AA seq 785 aa
MSLPTKRSTCPSSSSSSSSPPMKKAKNGLHPPSADKVGFPMEEEDEDPTPSAANLSRKKA
TLPQPSKKLVIKLNKAKPSLPTNFEDTTWDNLQSAIRAIFLKQPFSFDLERLYQAVDNLC
LHKLEGKLYQRIQKECEEHISAALQSLVGQDTDLSVFLSLVENCWQDFCDQMLMIRSIAL
SLDRKYVIQNPNIRSLWEMGLQLFRKHLSLSPDVEQRTVTALLRMIEKERLAEAVNRTLL
SHLLKMFTALGIYTESFEKHFLECTSEFYAAEGMKYMQQYDVPEYLKHVEGRLHEENERC
ILYIDPSTRKPLISTIEKQLLERHTVAILDKGFTPLMDGRRTEDLQRMYTLFSRVNALES
LRQALSSYIRKTGQKIVMDEEKDKDMVQSLLDFKASLDIVWEESFCKNESFGNTIKDSFE
HLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVFEAFYKK
DLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR
TKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLG
HCVLKADFTKAKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTGIEDKELRRTLQSLACG
KVRILHKYPKGRDVQDGDEFDFNDTFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY
QIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQI
YNYLA
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgtctcttccaaccaaacgctctacttgcccctcctcctcctcctcctcctcttccccg
cccatgaagaaagccaaaaacggcctccaccctccttccgccgacaaggttggctttccc
atggaggaggaggatgaagatcctactccctccgccgccaatctctcccgcaagaaagct
actctcccccagccttccaaaaagctcgtcatcaagctcaacaaagctaaaccaagtcta
cctacaaactttgaagacactacctgggataatctccagtcagctatcagagctatattc
ctcaaacagcccttttcttttgacctcgagcggctttaccaggctgttgataacctttgc
ttgcataagctggaaggaaagctttaccaacggattcagaaggagtgcgaagaacacatc
tctgcagctttacagtcgttagttgggcaagacaccgatctgtctgttttcttgtcactc
gttgagaattgctggcaggatttctgtgaccagatgctgatgatccgtagtatagccttg
tctttggataggaagtatgtcatacagaacccaaatatacgttcattgtgggagatgggc
ctgcagcttttccggaagcatctttctctgtcccctgatgttgagcagaggactgttact
gctctcttgagaatgattgaaaaggaaaggttagccgaagctgttaataggactttacta
agccatctcttaaagatgtttactgcactgggaatatatacggagagctttgagaaacat
ttccttgaatgcacttctgaattttatgctgctgaaggaatgaagtatatgcagcagtat
gacgttcctgagtacctgaagcatgtcgagggaaggttgcatgaagagaatgaaagatgc
atactatacatagatccatcgaccaggaaaccgttgatatcaactattgaaaagcaactc
cttgagcgtcatacagttgcgatccttgataagggtttcacaccattaatggatggacgt
cgtactgaggacctccagaggatgtacaccctgttttctagggtcaatgcacttgagtct
ttgaggcaggcgcttagttcctacattcggaaaactggacagaagattgttatggatgaa
gaaaaagataaagatatggtacaatcactattggacttcaaggcttctcttgacatagta
tgggaagagagcttttgcaagaatgaatcatttggcaacacaatcaaagattcgtttgag
catctgataaatcttcgccagaatcgtccagctgaacttatcgccaaatttttggacgag
aagctccgtgctgggaataagggtacttctgaagaagaattggagagcacccttgaaaaa
gtcttggttttgttcagatttatccagggtaaagatgtgttcgaagcattctataaaaag
gatcttgcaaagagactccttttgggaaagagcgcatcgattgatgctgagaagtccatg
atctctaagctcaagactgagtgcggtagccagtttacaaacaagctcgaagggatgttt
aaggatattgaattgtcaaaggaaatcaatgagtcattcaaacaatcgtctcaggccaga
acaaaactgccatcgggaattgagatgagtgtccacgttttaaccacagggtactggcca
acatatccccctatggatgtcaaacttcctcatgaattaaatgtctatcaggatatcttc
aaagagttctatttgagcaagtacagtggcaggaggttaatgtggcaaaattcactaggt
cactgtgttctgaaggcagatttcaccaaagctaaaaaggagcttgctgtttcccttttt
caggctgttgttttgatgttatttaacgatgcaatgaaacttagctttgaagacattaaa
gattccactggcatagaggacaaagaactgagaaggactctacagtcgcttgcctgtgga
aaagttcgtatcctgcataagtatccaaagggaagagacgttcaagacggggatgaattt
gattttaatgacacctttacagctcctctctatcgcattaaggtgaatgcaatccagatg
aaagagactgtagaagagaacacgagtacaacagagagagtattccaggacagacaatac
cagattgatgcagccattgttcgaattatgaagacaagaaaagtcttaagccacactctc
ttaatcactgagctcttccaacagctgaaattcccaataaaaccggctgatctgaagaag
aggatcgaaagcctgatcgatcgagagtacttggagagggacaagagcaaccctcagata
tataattatcttgcttag

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