Brassica rapa (field mustard): 103853739
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Entry
103853739 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103853739
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103853739
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103853739
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103853739
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103853739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103853739
NCBI-ProteinID:
XP_009128893
UniProt:
M4DZW3
LinkDB
All DBs
Position
A02:complement(22905239..22910380)
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AA seq
748 aa
AA seq
DB search
MDSIPPSSLQILSQILPLFGIFLLNFETFTNFWSQFQKFLLQLPSIRSRAQRLPPKLNPS
FLFYFSSSVSLAFLRQFDPGSLLMASSDPPPSPKIENPVKTLDDESSPTAPIRALVTHSL
ALSSPIRQIQNPVESSSSPSNNECRDSQITPAGSYMPSFEYLSDDDDDHKIEPAEPFSWS
YLKNEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLLDALRYYKYQDTCNCGNESFCVLKS
LRDHIELALRSSGYDLQIHRFRDNLNYFSSDFQINNQEDAHEFLQSFLDKLERCSLDLTS
RNTPGTVVSSQGVNIVDNVFGGRLVSKLHCCNCNSISEIFEPSVGWSLEIDDVEDLSSAL
ESFTCVEKLEDQLTCDECKEKVSKEKQLKFDKLPLVATFHLKRFKNDGVYMEKIFKDVRF
PLELDMLPYMSSNENPEVSTKYYLYAMVEHQGSGVHYGHYSSYVRSAPGTWHHFDDAKVR
RISEECVLSKNAYMLFYAREGTSWFSSAFEELKTLYEATPISFSPTSVLETTCREECNAN
KACNGSVGVSVPGGDYRCDEPQDEVFYSAEPISYDVSFAFDSPPKADESGKPFAETFHQK
EATMYPACNRATTVDASVPEIKIQEKDPSPKRKAAERATIGEDAYLPKPKIQKPNSFAKR
QGPFQIQREHLQNKKEETHETKPIRSTVAAASVADLKEKEHAIQYLRNMPSSRSRMLAAA
IGVEVKKKNISNIRRSNLHRNLSGRPSN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatcccaccttcttccctccaaatcctttcccaaatcctccccctttttgga
atattcctcctaaatttcgaaactttcaccaatttttggagccaatttcaaaaatttctc
cttcaattaccttcgattcgatctcgagcccaacgacttcccccaaaactaaaccctagc
ttcctcttctacttctcctcctccgtttccctcgctttcctccgacaattcgatccgggt
tcgttgctaatggcgtcgagcgatccaccgccgtctcctaaaatcgaaaacccagtcaaa
accctagacgacgagtcttcccccacagcgccaattcgagcccttgttactcactcgcta
gccctctcctcgccaattcgccagatccaaaacccagttgaatcttcatcttcgccctct
aataacgagtgcagagattctcaaatcacgccagcagggagttacatgcctagttttgag
tatctcagcgacgacgacgacgatcacaagatcgaacctgcagagcccttctcgtggtcg
tatctgaagaatgaacccactggtgttggtgctggattgtataactcaggcaacacttgt
ttcatagcttctgtgttgcagtgcttcactcatactgtgcctctcctcgacgcgcttcgt
tattacaagtatcaagatacttgcaactgtgggaatgagagtttctgtgttctgaagtct
ctcagagatcatatcgagcttgctctgaggtcttcaggatatgatctacagatccatcgg
tttcgtgataaccttaattatttctcgtctgacttccagataaacaaccaagaagacgct
catgagtttctgcagtcgtttttggataagttagagagatgttctttggatcttactagt
agaaacacgcctggaactgttgtctcttctcaaggtgttaacattgttgacaatgtcttt
ggtgggcgtctcgttagtaagcttcattgctgcaactgcaactccatttcagagattttt
gaaccgtctgtaggatggagtcttgaaattgacgatgtggaagatctttctagcgctcta
gagtcttttacttgcgttgaaaaactcgaggaccagcttacgtgtgatgaatgtaaagag
aaagtctcaaaggagaagcaacttaagttcgataagttgcctcttgttgctacgttccat
ttgaagaggtttaagaatgatggagtctatatggagaagatttttaaagatgtcaggttc
cctttggagttggatatgcttccttacatgagcagtaacgaaaatcctgaagtttcaaca
aaatactatctctatgccatggtggagcatcaagggagtggagtacattatggtcattac
tcatcttatgtgaggtcagctcctgggacatggcaccattttgatgacgcaaaggtcagg
agaatcagcgaagaatgtgttctatcaaagaatgcttatatgttgttttatgcaagagaa
ggaacttcttggttctctagtgcttttgaagagctgaagacattatatgaagctactccg
ataagtttctcgcccacttcagtgcttgagaccacctgcagagaggagtgtaatgccaac
aaagcttgtaatggctcggtgggagtatcggttccgggtggagattaccgttgtgacgag
ccacaagatgaagtgttttattcagcagagcctatcagttatgacgtatctttcgccttt
gactcaccacctaaggctgatgaatctgggaaaccgtttgctgagacctttcaccaaaaa
gaggctactatgtatccagcttgcaacagagctactaccgttgacgcttctgtgcctgag
atcaagattcaagaaaaagacccatctccaaaacgaaaagctgctgagagagctaccatt
ggtgaagatgcttatctgcctaagcccaagattcaaaaaccaaactcttttgcaaaacga
caaggaccatttcagattcaacgagagcatttgcaaaataagaaggaagaaactcatgaa
acaaagccgattagaagcaccgttgctgctgcttctgtagcagatcttaaggagaaagaa
catgctattcaatatctcaggaacatgccttcgtctcgctctcgaatgcttgctgcagct
ataggtgttgaggtcaaaaagaagaatatctctaacatcagaagatcgaaccttcacagg
aatctctctggacggccatcaaactga
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