KEGG   Brassica rapa (field mustard): 103853921
Entry
103853921         CDS       T03449                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103853921
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103853921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103853921
   03041 Spliceosome [BR:brp03041]
    103853921
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103853921
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103853921
Spliceosome [BR:brp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103853921
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 103853921
NCBI-ProteinID: XP_033139886
LinkDB
Position
A02:25266515..25267738
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDAAVESVRDHDDPLTT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggaagaaaggaaacggtgttggatttggctaagtttgtggataagggcgtgcaa
gttaagctgactggtggtagacaagtcactggaactcttaaaggctacgatcagttgctg
aaccttgttctagatgctgcggtggagtctgttcgagatcatgatgatccattgacgact
actgaccagaccagacgccttggtttaattgtttgtcgtggaactgcggtgatgctcgtc
tcaccaactgatggaactgaagaaattgctaaccctttcgttcaaccagaggctgtctaa

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