Brassica rapa (field mustard): 103854020
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Entry
103854020 CDS
T03449
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103854020
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103854020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
103854020
NCBI-ProteinID:
XP_009129175
UniProt:
M4ECV7
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Position
A02:24505310..24515968
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AA seq
590 aa
AA seq
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MAASSSSNASFFGVREEDQTHLLPPNPSAAVAPPPHHQPPQSQQPLEAPPQKKKRNQPRT
PNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRK
VYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCG
TKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNSNNNSS
SMMLGLSHTGPPQNLDHHSGDVLRLGSGEGVGEGAASRSSSDLIAANSSGYFMQDQNHSF
HDQQQGFLAASNNIKPSPMNFQQSLMQFSHDSHNSPSSNLFNLSFLSGNNGVASATSNHN
AAAVSSGNLMISNHFDGENAIGGGGGGEGSTGLFPNNMINSTDRTSSGAVPSLFSSSMQN
PISTPQMSATALLQKAAQMGSTSSNNNNNNNNNGSSNNNNNNASSILRNFGSGMYGENES
NLYDLMNSFSNPDPTGNNSNGVNSPFGSYRGVNKGLNADKQSLTRDFLGVGQIVRSMSGS
GGVQQQQQQHGNSRERVGSSSDSVDRNSNTFNPGGGPATSPPYGIHHASF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctaatgcttccttctttggagttcgagaagaagatcaaact
caccttcttcctccgaatccctccgcggccgtcgctcctcctcctcaccaccagccaccg
cagtctcagcaacctcttgaagctccaccgcagaaaaagaagagaaatcaaccaagaact
ccaaattccgatgcagaagtgatcgctttatctccaaagacactaatggctacaaataga
ttcatatgcgaagtatgcaacaaaggttttcagagagaacagaatctacaacttcatcga
agaggacacaatctcccatggaaacttaagcagaagtcgaccaaagaggtgaagaggaaa
gtgtatctttgtccggagcccacgtgcgtccaccatgatccgtcacgtgctctcggagac
ctcaccggaatcaagaaacattattaccgtaaacacggtgaaaagaagtggaaatgcgag
aaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgtggt
accaaagaatatcgttgcgactgtggtacactcttctcccggcgagatagtttcattaca
catagagccttctgtgacgcgttggctcaagagagtgcgagacacccaacttctttgact
tctttaccaagtcatcacttcccgtacggacaaaacaccaactccaacaacaacagttca
agcatgatgcttggtttgtcccacacggggcccccacagaatcttgatcatcactctggc
gacgttctccgacttggaagcggcgaaggagtaggtgaaggagccgcctcacgctcttca
tctgatctcattgctgcaaattcttcaggttacttcatgcaagaccaaaaccatagcttt
catgatcaacaacaaggatttttggctgcaagcaataacatcaagccatcaccaatgaat
tttcaacagagtctgatgcagttctcgcatgatagccataactctccttcctccaatctc
ttcaatctcagtttcctctctggaaacaacggagttgcttctgctacaagcaaccataat
gctgctgctgtttcttccggtaatcttatgatctcgaaccattttgatggcgaaaatgct
attggaggcggaggaggaggggaaggaagcacgggtctctttcctaacaatatgattaac
tcgacggacagaacaagctcaggagcagtgccttcactctttagctcatcaatgcaaaat
cccatatcaacacctcaaatgtcagccactgctcttcttcaaaaagctgctcaaatgggt
tcaacctcaagcaacaacaacaacaacaacaacaacaacggaagcagcaacaataataat
aacaatgcctcatccattctaagaaactttgggagtggaatgtacggagaaaacgagagt
aatctctacgatttgatgaactctttctctaaccccgatccaacgggaaacaactctaat
ggagtaaattctccgtttggttcgtacagaggagtgaacaagggattaaacgctgataaa
caaagcttgactagagactttcttggagttggacagatcgtaagaagcatgagtggaagc
ggaggggttcaacaacagcaacaacaacatgggaatagtagagaaagagttggctcttcg
tcggattctgtcgatagaaacagcaacacttttaatcctggtggtggtccggcaacttca
ccaccgtatggaatccatcatgctagtttctag
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