Brassica rapa (field mustard): 103854045
Help
Entry
103854045 CDS
T03449
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103854045
Spliceosome [BR:
brp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
103854045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Ig_VWA7
Motif
Other DBs
NCBI-GeneID:
103854045
NCBI-ProteinID:
XP_009129209
UniProt:
M4ECX7
LinkDB
All DBs
Position
A2
Genome browser
AA seq
615 aa
AA seq
DB search
MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPDFSILSKSGDFDNTI
SCLIITHFHMDHVGALPYFTEVCGYNGPVYMSYPTKALSPLMLEDYRRIMVDRRGEEELF
TSAHIASCMNKVIPLDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNM
TTDRHLGAAKIDRLQLDLLISESTYATTTRGSKYPREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHVTHNPFD
FKNVKDFYRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH
KLMSGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNIVLVHGEKPSM
MSLKDKITSELGIPCFVPANGETVSVASTTFVKANASDMFLKICSNPNFRFSNSSTQLRV
TDQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKDHVVSLAYCCPVKVKGESDDVGLIKQL
SEKISETVSCADEIHESETCLQVGSFKGSLCLKEECVHRRGISSSCSEVKFLCCNWSVAD
LELGWGIINAMKQNL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattgcctcgtactgggtgctggacaagagatagggaagagctgtgtagta
gtaacgatcaatggcaaaaagataatgttcgattgtgggatgcacatgggctgcgacgat
cacaaccgatacccagatttctctatcctctccaagtccggtgatttcgataacaccatc
tcctgtctcatcatcactcactttcatatggatcatgttggagcgcttccttacttcacg
gaggtctgtgggtacaatggtcctgtttacatgtcgtatcccacgaaggctttgtctccg
ttgatgcttgaggactataggaggattatggtggatagaagaggcgaggaggagcttttc
acttcggcccatatcgctagttgcatgaacaaagtaattccattggatttgaagcaaacg
attcaagttgatgaagaccttcaaattcgtgcctattatgcagggcatgtacttggagca
gtgatggtgtatgcaaaggtcggagatgcggcgattgtgtacaccggagattacaatatg
actacagatagacatcttggagcagcgaaaatcgacaggctccagttggatcttctcata
tcagagtctacatatgcaactaccactcgcggctcaaaatatcccagggagagagagttt
cttcaagctgttcataaatgtgttgctggcggagggaaagctctgattccttcatttgct
cttggaagggctcaggaactatgcatgctgctcgatgattactgggaacgcatgaatata
aaggttccaatttacttctcgtcaggtttgaccatccaagcaaacatgtattacaaaatg
ctcataagctggacaagccagaacgtcaaagaaaagcatgttacacataacccatttgat
tttaagaatgttaaagatttctatcgatctcttatacatgcacctgggccatgtgttctc
tttgccacacccggtatgctctgtgccggattctcactagaagtgttcaagcattgggct
ccttcacccctaaatctcgttgccctgcccggttactctgtggctggtactgttggtcac
aaactgatgtctggtaaaccaacaacggttgatctctacaatggcaccaaggttgatgtc
cgttgcaagatacatcaagtggctttcagtcctcacacagatgcaaaaggaataatggat
ctcacaaagtttctttccccaaagaacattgtactcgtgcacggagaaaaacccagcatg
atgtctctcaaggacaagataacctcagagcttggcatcccctgtttcgtccctgccaat
ggcgaaacggtttcggtcgcttcgaccacttttgtaaaagcaaacgcttctgatatgttt
cttaaaatctgctctaacccaaacttcagattctcaaactcctctactcagctccgtgtt
acggaccagagaaccgcagatggggttttggtaatagagaagagcaaaaaggcaaaaatt
gttcaccaagatgaagtctctgaggtgttacatgagaaagaccatgtggtctctttggct
tattgttgtcctgtcaaagttaagggagaatcagatgatgttggtctgatcaaacagttg
tcggaaaagatctcggagacagtgtcttgtgctgatgagatccatgaatctgagacatgt
ttgcaggttggatctttcaagggttctttgtgtctgaaagaggagtgtgtgcatagaaga
gggataagtagtagctgtagtgaagttaagttcttgtgttgcaactggtctgttgcagat
ttagagcttggttggggaatcatcaatgctatgaaacaaaatctttga
DBGET
integrated database retrieval system
