Brassica rapa (field mustard): 103854439
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Entry
103854439 CDS
T03449
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00061
Fatty acid biosynthesis
brp00071
Fatty acid degradation
brp01100
Metabolic pathways
brp01212
Fatty acid metabolism
brp04146
Peroxisome
Module
brp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103854439
00071 Fatty acid degradation
103854439
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103854439
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brp01004
]
103854439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103854439
Enzymes [BR:
brp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103854439
Lipid biosynthesis proteins [BR:
brp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
103854439
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of breast milk
103854439
Exosomal proteins of breast cancer cells
103854439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
103854439
NCBI-ProteinID:
XP_009129620
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All DBs
Position
A05:26881320..26886583
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AA seq
693 aa
AA seq
DB search
MDSSSAARRRINSIHSHLVTSSRSSPLLRSNPTAGEFCLDNGYSVALPEKLSTGDWNVYR
SARSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEVG
TARTAIGSGLVHHGITMGSTVGIYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVQFI
VNHANVQAIFCVAETLNSLISGLSEMPSVRLVVVVGGLNESLPSLPASAGVKVVSYSVLL
NQGRSKPQPFVPPKPDDVATICYTSGTTGTPKGVVLTHANLISNVAGSSFSVKFFSSDIY
ISYLPLAHIYERSNQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYDG
INNAVKSSGGLKERLFNAAYNAKKQALLNGKNASGIWDRLVFNKIKDKLGGRVRFMTSGA
SPLSPEVMEFMKICFGARVLEGYGMTETACVISGMDEGDNLIGHVGSPNPACEIKLVDVP
EMNYTSADQPNPRGEICVRGPIVFRGYYKDEVQTKEVVDEDGWLHTGDIGLWLPGGRLQI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLKSWA
ASQGIKHGDPRELCNNPRVKAAVVSDMDAVGREAQLRGFEFAKAVTLVLEPFTLENGLLT
PTLKIKRPQAKEYFAEAITNMYKELAASDPTHR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcctccgccgcgcgccgccgcataaactccatccactcccatctcgtcacg
tcctctcgctcctcccctctcctccgctccaatcccacggccggcgagttctgtctcgat
aatggatacagcgttgcgcttcccgagaaactgagcactggcgattggaacgtctacaga
tctgctcgatctccgtttaagctcgttagcagattccctgatcatcctgatatcgccact
ctccatgacaactttgagcatgctgttcatgattttcgggattacaagtacttaggaact
cgcgttcgcgtcgacggaacagttggagactacaaatggatgacgtatggtgaagttggt
acggcgagaactgctataggttctggtttggttcaccacggaatcaccatgggatctact
gttggaatttactttatcaaccgcccagagtggctcattgttgatcatgcttgttctgct
tattcttatgtgtcggttcctttgtatgatactcttggtcctgatgctgtacaatttatt
gtcaatcatgcaaatgtgcaagccattttttgtgtggcggagacgttaaactccttaatt
agcggcttgtctgagatgccaagtgtacgcctcgtggtggttgttggagggttgaatgaa
tctttgccttcccttcccgcatcagcaggagtgaaagtcgtctcatattcagtgttactg
aatcagggacgcagtaaacctcagccgttcgtaccaccaaaaccagatgatgttgcaacc
atatgctatacaagcggaacaactgggacccccaagggagtcgtattgactcatgcaaac
ttgatttcaaatgttgctggatccagttttagtgtgaagtttttctcttcagatatttac
atttcatatctcccgctggcacacatttacgaacgatcaaatcaaatcctaaccgtgtac
tttggagttgctgttggtttctaccaaggggacaatatgaaactactggatgatttggcg
gctctgagacctactgtattcagcagtgttcctcgattatacaatagaatatatgatggt
atcaataatgctgtaaaatcctctggcgggctgaaagagaggctcttcaatgctgcctat
aatgcaaagaagcaggctctcctaaatggaaagaatgcttctggaatatgggacaggctg
gtctttaataaaataaaggacaaacttggaggccgggttcgttttatgacgtctggggct
tcacctctgtctcctgaagtcatggaatttatgaaaatatgctttggagcaagggtttta
gagggatatgggatgactgaaacagcttgtgttataagtgggatggacgagggtgataac
ctcattggacatgttggctctcctaatccagcttgtgaaataaagcttgtggatgtcccg
gaaatgaactatacatcggcagatcagcccaatccccgcggcgaaatttgtgtgaggggt
cctattgtttttagaggctattacaaagatgaagttcaaacgaaggaagtggttgatgaa
gatggatggcttcacactggagatataggcctgtggcttccgggaggacgtctacaaatt
attgacaggaagaagaacatcttcaagttggcgcaaggggagtacatagctccagagaag
attgaaaacgtgtatgccaaatgcaaatttgtgggacaatgcttcatatatggtgatagc
tttaattcatcattggtcgctgttgtatcggttgatccagatgtgcttaaaagctgggcc
gcttcgcaaggcattaagcatggagatccgagggaattgtgcaataacccgagagtgaaa
gcagcagtagtatctgacatggacgctgttggaagagaagctcagttgagaggctttgag
tttgcaaaagctgtgacgttggtgctggagccattcacgctagaaaatggcttgttgaca
ccgacgttaaagattaagagaccacaagcaaaggaatatttcgcagaagcaataacaaac
atgtacaaggagcttgctgcttctgatcccacccaccgctaa
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