KEGG   Brassica rapa (field mustard): 103854514
Entry
103854514         CDS       T03449                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103854514
   03400 DNA repair and recombination proteins [BR:brp03400]
    103854514
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103854514
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103854514
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT RIX1 HEAT_2 HEAT_EZ TOR1L1_N HEAT_EF3_N
Other DBs
NCBI-GeneID: 103854514
NCBI-ProteinID: XP_009129703
UniProt: M4DW25
LinkDB
Position
A02:complement(27398249..27404177)
AA seq 1134 aa
MAALNNLTEHLEAFVDVTRSPTHHAESLKAIATSLEKSVLSINQLVVEMDMYLTTTDDVV
RARGILLLAEMLDYLKSKPLDNAVVNSLVGFFTAKLAEWRSVRGALSGCLALIKRKGVAG
LVTATDAEAVAKSMAQSVQVQSLALYDRKLCFELLECLLEQYPEAMINLGDLMVYATCEA
IDGEKDPPCLMVAFHVVELLARLFPSPSGPVASEASDLFEFISCYFPLHYTHTKGDEASI
PREDLSRGLSLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCAVNYGVNRMKK
HYEGIWSAIKDALYASTGTDLSFGLESLTSPGFEMNEIHREAVNLLQRLVKQDISFLGLV
ADDIRVKMIFDTISRYSRYEEMLDTSKLEVLVVSQILSVSARASVESCNTIFETFFVRLM
NTLGIVESTSTGDLVHNENSTVSTRLYHGGLHLCIELLTASKDLIPSSEEDSSTPGCAQQ
SWCSIVNKFSASLIEAFTSAVQSSNDDCTADAYLGVKGLLAMGMFRGGSSPVSRSEYEKI
LTTLTSIIAANSAKTVKWELALKALVCMGSFIDQYHESEKAMSYMGIVVENLVSLVRSSH
CSLPHPMILEATSEVCSTSPTYVEKMVQGFEEAFCSSFSDFCVNGNFKSIENCSQLLECV
TNKLLPRVTEIDGLEKSLVSFAISMWNQIESSVVFSYAFNGREFVEAAMKTMRQIVGVAS
VNSQNSIIQKAYNVISLSTLPAMESIPLTFAALEGLQHDLSTRDELILSLFASVIIGASP
MASIPDVKSLIKLFMVSSLKGYIPAAQALGSMVNKLGVGSGGTNTSSDCSLEEACDIIFH
ESFESGNTNSSDVTSKTICGSETLLAKICLGFYGSLDLQTRAITGLAWIGKGLLMRGDKR
VNEIALVLVECLKSTNSSGNALHPTAMKHAADAFLTLMSDSEACLNRKLHAVIRPLYKQR
FFSITVPILESLIVNSQTPLSRTMLHVALAHVISNVPVTVILDNTKKLLPVILEGLSVLS
VDSVHKEILFSLLLVLSGTLTDIKGRQSVSDNAHRIIECLVKLASYSHLMVVRETAIQCL
ATLLELPHRRIYPFRREVLQAVTKALDDPKRRVREEAIKCRQAWTSISSRSTPF
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggctgcactgaataatctcaccgagcacctcgaagctttcgtcgacgtcactcgttcc
cctactcaccatgctgagagtctgaaagcgattgctacttccttggagaagagtgtcttg
tctataaaccagttggtcgtggagatggacatgtatttgacgaccactgatgatgttgtc
cgagcacgaggtattctcttgcttgcggagatgctggattatctaaagtcaaagcctttg
gacaatgcagttgtcaatagtctcgttggattctttaccgcgaagctggcagagtggaga
tcggtgcgcggtgcactttctggttgcttggctctgattaagaggaaaggcgtagctggt
ttggtcactgctactgatgcagaagctgtggccaagtcaatggcacagagtgttcaagtg
cagtctttagcactgtatgatcgcaagctctgttttgaactgttggagtgccttctagag
caataccctgaagctatgataaatttgggagatttgatggtgtatgctacatgcgaggcc
atcgatggagaaaaagaccctccatgcttaatggtagcttttcatgtagtggagcttttg
gctcgattgtttcccagcccctccggtccagttgcgtctgaggcatctgatctttttgag
tttataagttgctacttcccacttcactatacgcatacaaagggtgatgaagctagtatt
ccaagagaagacctttcaaggggactatctctggcaatctcttccactcctttttttgaa
ccgtatgctattccgttgcttcttgaaaagctttcatcctctctaccagtcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctgtgaactatggagtaaaccgaatgaagaag
cactatgaaggcatttggtcggcaataaaagatgcactttatgcttccaccgggacagat
ttatcctttggtctagaatccctcactagtccagggtttgaaatgaatgagatccacaga
gaagctgttaatctccttcagaggcttgttaagcaagatatctcgtttttaggtcttgtt
gctgatgatatacgtgtaaagatgatcttcgataccatttctagatactcgcggtatgaa
gaaatgcttgacacgagcaaactggaggttcttgttgtcagtcagatactgtctgtgtct
gccagagcttctgttgagtcatgcaatacaatctttgaaacttttttcgtccgccttatg
aatactctagggattgtagagtcaacgtcaactggtgatcttgtgcacaacgaaaactcg
acggtttctactagactctaccatggaggtcttcatctttgcatcgaacttcttacagca
tcaaaagatcttattccgagttccgaggaagattcttcaacacctggatgcgcgcagcaa
tcatggtgctctatagttaacaagttctcagcttcactgatcgaggcgttcacttctgca
gtacaaagctctaatgatgattgtactgcagatgcatatcttggagttaagggtttgctg
gctatgggtatgttccggggcggctcttctcctgtatcgagatctgaatacgagaagata
ttgacgactttaacatcaatcatcgcagccaatagtgccaaaacagtgaagtgggaattg
gcattgaaagcgcttgtctgcatgggttcatttattgatcagtatcatgagagtgaaaag
gctatgagctacatgggtatagttgtcgaaaatttggtttcgcttgttcgctctagtcat
tgttctcttccacatccaatgatattagaagcaacttcagaagtttgctctactagccca
acgtatgtagagaaaatggttcaaggatttgaagaagctttctgttccagtttctctgat
ttctgtgtcaatggaaacttcaagtcaatcgaaaattgttctcagctcctggagtgtgtg
accaataaattgcttccacgtgtgacagagatcgatggtctcgagaaaagcttggtgagt
tttgctatcagtatgtggaatcaaattgaatcctctgtcgttttcagttatgcttttaat
ggcagggagtttgttgaggcagcaatgaaaacaatgcggcaaattgtaggagttgcttcg
gtaaactcgcagaatagtataatccaaaaagcttataatgtgatctcattaagcacgctt
ccagctatggagtctattcctctgacctttgctgcattagagggcttacaacatgacctg
tccactagggatgagttgatactttcactatttgcgtcggttatcataggtgcatctccc
atggcgtccattccagatgtgaaatcacttataaagctgtttatggtatcctctctcaag
ggttatatcccagcagcccaagctttgggttcaatggttaacaaattgggggtgggttct
ggtggaacaaatacctcaagcgattgttccttggaagaggcatgtgatataatattccac
gagagttttgaatctggaaacactaattcttctgatgtgactagtaaaactatatgtgga
agtgagacacttttggcaaagatatgtttaggtttctatggttcgctggaccttcagacc
cgcgctataacaggtctagcgtggattgggaaaggtttactaatgcggggtgataaaaga
gttaatgagatagctcttgtacttgtggaatgcttaaaatccactaacagttccggaaat
gctctgcatcctactgccatgaaacatgcagctgatgcattcctcacactaatgtctgat
tcggaagcgtgcctgaacagaaagcttcatgcagttatacggccactctataagcaacgc
tttttctctataacagttcctattttggagtcgttgattgtgaattcccagactccactg
tcgagaacaatgttgcatgtcgctctcgcgcatgttatatcaaatgttccagtcacggtc
atactggacaataccaaaaagctgctcccggtgatattggaaggcttgtctgtcttaagc
gttgactctgtgcataaagaaatacttttcagtctgttactggttttatctggaacgctt
actgatattaaaggacggcaatctgtcagtgataatgcacatagaatcattgaatgcttg
gtcaagcttgcgtcatactcacatctaatggttgtaagggagacggcgattcagtgtctt
gctactttgttggaattgccccatagaagaatttatcctttcagaagagaggttttacaa
gcggtaacaaaggcacttgatgatccaaaacgtagagttcgggaagaagcgattaaatgc
aggcaggcttggacgtcgatctcatccaggagtacccctttctga

DBGET integrated database retrieval system