Brassica rapa (field mustard): 103854624 Help Entry 103854624         CDS       T03449                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism brp  Brassica rapa (field mustard) Pathway brp03040   Spliceosome Brite KEGG Orthology (KO) [BR:brp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103854624  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:brp03019]     103854624    03041 Spliceosome [BR:brp03041]     103854624 Messenger RNA biogenesis [BR:brp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      103854624 Spliceosome [BR:brp03041]  Complex B   Other components    Prp19-related factors     103854624  Complex C     103854624 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Mad3_BUB1_I TPR_15 NRDE-2 Motif Other DBs NCBI-GeneID:  103854624 NCBI-ProteinID:  XP_009129815 UniProt:  M4DVS5 LinkDB All DBs Position A02:complement(28077248..28081029) Genome browser AA seq 913 aa AA seqDB search MAISQDLYPSQEDLVYEEEILRNPFSLKLWWRYLISKSDSPFKKRFVIYERALKALPGSY KLWHAYLRERLEIVRNLPVTHPHYDSLNNTFERGLVTMHKMPRIWVMYLQTLTSQRLVTR TRRTFDRALCALPVTQHERIWEPYLVFVGQEGVPIETSLRVYRRYLMYDPSHIEEFIEFL LKSARWQEAAERLAFVLNDDQFYSIKGKTKHKLWMELCELLVRHANEISGLNVDAIIRGG IRKFTDEVGMLWTSLADYYIRKNLLEKARDVYEEGMMKVVTVRDFSVIFDVYSRFEESTV AKKMEMMSSSDEEEDEDVEEEEEEDVRLNFSLSVKELQRKILNGFWLNDDNDVDLRLARL EELMNRRPALANSVLLRQNPHNVEQWHRRVKIFEGDAAKQILTYTEAVRTVDPMKALGKP HTLWVAFAKLYEDHKDLVNTRVILDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGALE LMRRATAVPTVEVKRRVAADGNEPVQMKLHRSLRLWSFYVDLEESLGTLESTRAVYEKIL DLRIATPQIILNYAYLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVKRYGKA KLERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQRLEM YEIYISRAAEIFGVPRTREIYEQAIESGLPHKDVKIMCIKFAELERSLGEIDRSRAVYKY ASQYADPRSDPEFWNKWHEFEVLHGNEDTYREMLRIKRSVSASYSQTHFILPENMMQKDK IDVEEAKDELKKAGLPDDEMAALERQLMAAPMSTTVTSKDGGRRVGFVSAGVISQSGENA GKPVTGNGEDIELPDEDESDGDDNVEIAQKEVPAAVFGGLARKREEDGKEAEEDGAGKTL GALERIKRQKLAQ NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atggccatctcccaagatctctacccttcccaagaagacctcgtctacgaggaagagatc ctccgaaaccccttcagcctcaagctctggtggcgctacctcatctccaaatccgactcc cccttcaagaaacgcttcgtcatctacgagagagccctcaaggccctccccggaagctac aagctctggcacgcttacctccgcgagaggctcgagatcgttcgtaacctccccgtcact caccctcactacgactccctcaacaacaccttcgagagaggcctcgtgactatgcacaag atgcctaggatctgggttatgtatctccagacgcttacctcccagaggcttgtcactagg acgaggaggacgtttgatcgtgcgctttgtgcgttgcctgtgactcagcacgagaggatc tgggagccgtatcttgtctttgtggggcaggagggtgtccccattgagacctcgcttaga gtttatcgtaggtacttgatgtatgatccttctcatattgaggagtttattgagtttctg ttgaagtctgcgcgttggcaagaggctgcggagaggttggcttttgttttgaatgatgat cagttttactctattaaagggaagactaagcataagctgtggatggagctttgtgagctt cttgtgcgtcatgctaatgagatctcggggttgaatgtggatgctattattagaggaggg attaggaagtttaccgacgaggttgggatgctgtggacgtctcttgcggattattacatt aggaagaacttgcttgagaaggctagggatgtttatgaggaggggatgatgaaggttgtg actgtgagggactttagtgttatattcgatgtgtattcgaggtttgaggagagtacggtt gctaagaagatggagatgatgagttcgagtgatgaggaagaagatgaggatgtggaggag gaggaggaggaggatgtgaggcttaacttttctttatccgtgaaggagctgcagaggaag attctgaacgggttttggctgaacgatgataacgatgttgatctgaggttggctcgcttg gaggagctgatgaacagaagacctgcgttagctaatagtgtcctccttaggcagaaccca cacaacgttgagcagtggcatcggagggttaaaatcttcgagggagacgcagcgaagcag attctcacttacacagaagcagtgaggactgtggatcctatgaaggcccttgggaagcct cacaccttgtgggttgcgtttgctaaattgtatgaagaccacaaagacttggtcaacact agagtgattcttgacaaggcggttcaagtgaactacaagacagtagaccatctcgccagc gtctggtgcgaatgggctgaaatggagctgaggcacaagaatttcaaaggagcgttggag ctgatgaggcgtgctacggctgtgccaacggtagaagtcaaaaggagagtggctgctgat gggaacgagccggttcagatgaagctgcacaggtccttgaggctttggtccttttacgtt gatttggaggagagtcttggaacgctggagtcgacgagagctgtctatgagaagatattg gatttgaggatagctacgccgcagatcattctgaactatgcttaccttctcgaggagaat aagtactttgaagatgctttcaaggtgtatgagagaggtgtgaagatattcaagtatcct catgtgaaagacatatgggttacttatcttacaaagttcgtcaagagatatgggaaggca aagctggagcgggccagagagttgtttgagcatgctgtttcaatggctccatcagatgct gtcaggaccttataccttcagtacgccaagctagaagaggactatggtctggccaagcga gccatgaaagtttacgaagaagccaccaagaaggttccagaaggccagaggctggagatg tacgagatatacatttcccgtgcagcagagatctttggtgtcccaagaacgagagagata tacgagcaagcaatagaatctggacttccacacaaggatgtgaagatcatgtgcataaag tttgcagagctggagagaagtctgggagagattgatcgttctcgtgcagtctacaagtac gcctctcagtatgctgatccgagatccgacccggagttctggaacaagtggcacgagttt gaggtgttgcatgggaatgaagacacgtatagagagatgcttaggatcaagagaagtgtc tccgcaagttacagtcagactcatttcattctgccggagaacatgatgcaaaaggacaag atagatgtggaggaggctaaagacgagctgaagaaagcgggtttgccagatgatgaaatg gcggctctggagaggcagctcatggcggcgccaatgtctaccacggttacatctaaggac ggtgggagaagagtcgggtttgtgagcgcaggagtcatctcgcagtcaggtgagaatgct gggaagcctgtgacagggaatggagaagatattgagcttccggatgaagatgagtctgat ggagatgacaatgtagagattgctcagaaagaggttcctgctgctgtgtttggaggactt gctagaaagagagaggaagatggtaaagaagctgaggaagacggtgcagggaagactctg ggtgcgctagagaggataaagaggcagaagctagctcagtga

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