Brassica rapa (field mustard): 103854703
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Entry
103854703 CDS
T03449
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103854703
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
103854703
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Other ribosome biogenesis factors
103854703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
Methyltransf_31
FtsJ
PCMT
Methyltransf_4
AcetylCoA_hydro
ASPP2-like_RA
RsmF-B_ferredox
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
103854703
NCBI-ProteinID:
XP_009129916
UniProt:
M4DVK0
LinkDB
All DBs
Position
A02:28584339..28590648
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AA seq
489 aa
AA seq
DB search
MARHKSNAPPKLTQQPRKPQQSSGAERSALYARREAAKVLHTVLRGDAERRAVASIKSLV
FSPSVRNKRGTFALVCETLKYLDVIKDVLEIANVLNSKWKRQEPLVYIICYDILFGKETP
SIGDAEKFLMRRKDALLSGLATLLVRKKVKSVEELLDLSQLNGHIKQRYVRVNTLKMDVD
SAVKELEKLYKVQKDETVPDLLVMPPGSDLHAHPLVMNGRIFLQGKGSSMVAAALQPEAG
WEVIDACSAPGNKTVHLASLMKGQGKIIACELNEERVKRLEQTIKLSGATNIEVFHGDFL
SLNPTDPSFAKVRAILLDPSCSGSGTITDRLDHLLPSHSADNTNYDSIRLHKLAVFQKKA
LAHALSFPQVERVVYSTCSIHQIENEDVVSSLLPLASSLGFKLATPFPQWQRRGLPVFAG
SEHLLRMDPVEDKEGFFIALFTKTNNLDNPKASELPEGECRGRRKRFYPFLWPKVFFRAW
NGRLHGSRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcacaaatcaaacgcgccgccgaaactcacacaacagccgcggaagccacaa
caatcctccggcgccgagagatcagctttatacgccagaagagaagcggccaaagtcctc
cacaccgttctccgaggcgacgcggagcgccgagccgtcgcgtcgataaagtcactcgtc
ttcagcccttccgtacgcaacaaacgcggcaccttcgctctcgtctgcgagacgctaaag
tatcttgatgtgataaaggatgttcttgaaatcgctaacgtgttgaatagcaaatggaag
aggcaagagccattggtctacatcatttgctatgatatccttttcggcaaggagactcca
tcgattggtgatgctgagaagtttctcatgcggcgtaaagatgctctactgtcaggttta
gccacgcttttagtgaggaagaaagttaaaagcgttgaagagttgctggatctttctcag
cttaatggtcatataaagcaacgttatgttcgtgtaaatacacttaagatggatgtagat
tcagcagtgaaggagctggagaaactgtataaggtgcagaaggatgagacagttcctgac
ttgttggtgatgccacctggcagcgatttgcatgctcatcctttggttatgaacgggcgt
atatttttgcagggaaagggaagttcaatggtagcagcagcactgcagccagaagcagga
tgggaggttattgatgcctgttcagctccaggcaacaaaactgttcatcttgcttctctt
atgaaaggacaaggaaaaatcatagcatgtgagctaaatgaagaacgagtaaagcgtttg
gaacagactattaagctgtctggtgctaccaatattgaagtctttcatggtgattttctg
agtctaaatccgacagatccttcttttgcaaaggttcgagctatattgttggatccttct
tgctctggctctggaaccattacagatcgtctggaccatctccttccttctcactcagca
gataacacgaactatgactccataagactccacaaactcgctgttttccagaagaaggct
cttgctcatgcactctcctttccacaggttgagagagtagtatacagcacatgctcaatc
caccagatagaaaacgaagatgtggtctcttctctattacctctggcttcatccttaggc
ttcaaactcgctaccccttttcctcagtggcagcgtcgcggtctccctgtattcgcggga
tctgagcatttactcaggatggatccggtggaggacaaagaagggttcttcatcgctttg
ttcaccaagacaaacaaccttgataatccaaaagcgtctgagcttccagaaggagagtgt
agaggaagacgcaaaaggttttatccatttctttggcccaaagtgttcttcagagcttgg
aatgggaggttgcacgggtccaggaggtga
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