Brassica rapa (field mustard): 103854961
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Entry
103854961 CDS
T03449
Name
(RefSeq) calnexin homolog 1
KO
K08054
calnexin
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04141
Protein processing in endoplasmic reticulum
brp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103854961
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103854961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103854961
04131 Membrane trafficking [BR:
brp04131
]
103854961
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
brp04091
]
103854961
Chaperones and folding catalysts [BR:
brp03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
103854961
Membrane trafficking [BR:
brp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
103854961
Lectins [BR:
brp04091
]
Calnexin / calreticulin
103854961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Vma12
Motif
Other DBs
NCBI-GeneID:
103854961
NCBI-ProteinID:
XP_033140395
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All DBs
Position
A02:complement(29920124..29923151)
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AA seq
535 aa
AA seq
DB search
MMRDRQLFSGLMLILALLSLQNLCHCDDNTVLYESFDEAFDGRWIVSKNGDYEGVWKHAK
SEGHDDYGLLVSEKARKYGIVKELDEPLNLKDGTIVLQYEVRFQEGLECGGAYLKYLRPQ
EAGWTPEGFDSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKL
SHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAK
IPDPNAVKPDDWDEEAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEA
PKIDNPKCEAAPGCGEWKRPMKKNPAYKGKWSAPMIDNPAYKGIWKPRDIPNPDYFELDR
PDFEPIAAIGIEIWTMQDGILFDNMLIAKDEKVAESYRQTTWKPKFDVEKEKQKAEEEAA
SSADGLKSYQKVVFDLLNKVADISFLSAYKSKITELIEKAEEQPNLTIGVLVSIVVVFFS
LFIKLIFGGKKAAPAATVEKKKKPEVGESSKSEDETEKKEETAAAPRKRQPRRDN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagaccggcagctattctccggccttatgcttatcctagctctcctctcgctc
cagaacctttgccactgcgacgataatacggtgttgtatgaatcgttcgatgaggcgttt
gatggtcgctggatcgtttcgaagaatggtgattacgaaggtgtgtggaagcatgcgaag
agtgagggacacgatgattatggacttctcgtaagcgagaaggctcgcaagtacggtata
gtgaaggagcttgacgagcctctaaacctcaaggacggaaccattgttcttcagtacgag
gttcgtttccaggaagggcttgagtgtggcggtgcttacttgaagtacctccgtcctcag
gaagctggatggacacctgaagggttcgacagtgaatctccttactctatcatgtttggg
cctgacaagtgtggagccacaaacaaagttcatttcatcttgaaacacaagaacccaaag
agcggcgagtacgttgagcaccatctcaagttccctccctctgttccttacgacaagctt
tcccatgtctacaccgctatcttgaagccagacaacgaggttaggattctggttgatgga
gaggagaagaagaaggctaatttactctctggggaggactttgagcctgcgttgatccct
gccaagaccatccctgaccctgaagacaagaaaccagaagactgggatgagagagccaag
atccctgatcctaacgccgtgaagcctgacgactgggacgaggaggcgcccatggagatc
gaagacgaggaagctgagaaacccgaaggatggttagatgacgagcctgaggaggtggac
gacccagaggcgaccaagcctgaagactgggatgatgaggaagatggtatgtgggaggct
ccaaagattgacaaccccaagtgtgaagcagcaccaggctgtggtgaatggaagagaccc
atgaagaagaatcctgcttacaaaggcaaatggagtgcgcctatgatagacaaccctgct
tacaagggaatctggaagcccagagacatccctaaccctgactacttcgagctagacaga
cctgacttcgaacccattgcggcaatcggtattgagatctggacgatgcaagacggtatc
ttgtttgacaacatgttgatagcgaaagacgagaaggtcgctgagagttacagacagacg
acatggaagccgaagttcgatgttgagaaagagaaacaaaaggcggaagaggaggctgct
agctctgctgatggtctcaagagctaccagaaggttgtgttcgacctcttgaacaaggtt
gctgacatttctttcctaagtgcctacaagtctaagatcacagaactgattgagaaagct
gaggaacaaccaaacttaaccattggtgtcctcgtctccattgtcgtagtattcttctcg
ctcttcatcaagcttatcttcggtggcaaaaaggcggcgccggcagcaactgtggagaag
aagaagaaaccagaagtaggagagagctcaaagagtgaagatgagacagagaagaaggaa
gaaaccgctgctgctcctcgcaaaaggcaaccgaggcgtgacaattag
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