Brassica rapa (field mustard): 103855125
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Entry
103855125 CDS
T03449
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103855125
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103855125
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
103855125
NCBI-ProteinID:
XP_009130327
UniProt:
M4ET92
LinkDB
All DBs
Position
A05:27941319..27946401
Genome browser
AA seq
1146 aa
AA seq
DB search
MASNNHFTNSRSNLSTNSDAAEAVRNHQQQQPPGVTFARRTSSGRYVNYSRDDLDSELGS
VDFTNYTVHIPPTPDNQPMDPSISQKVEEQYVSSSLFTGGFNSVTRAHLMDKVIDSETSH
PQMAGAKGSSCAIPGCDVKVMSDGRGQDLLPCECDFKICRDCFVDAVKAGGGMCPGCKEP
YRNTDLTDLAEDGQQKQQRPMLPPPSGGSKMERRLSLMKSTKSGLMRSQTGDFDHNRWLF
ETSGTYGYGNAFWTKDGNLGSEKDGHGMGPQDLMSRPWRPLTRKLQIPAAVISPYRLLIF
IRIVVLALFLMWRIKHQNPDAVWLWGMSVVCELWFAFSWLLDQLPKLCPINRATDLNVLK
EKFETPTPSNPTGKSDLPGLDMFVSTADPDKEPPLVTSNTILSILAADYPVEKLACYVSD
DGGALLTFEAMAEAASFANIWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRK
VKREYDEYKVRINGLPDSIRRRSDAYHAREEIKAMKQQRQNKEDEIVEPVKIPKATWMAD
GTHWPGTWLNSAPDHSRSDHAGIIQVMLKPPSDEPLHGVSEGFLDLTDVDIRLPLLVYVS
REKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGD
RLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRIALYGFDP
PRSKEHHPGCCSCCFPRKKKKKIPEENRSLRMGGDSDDDEEMNLSLVPKKFGNSTFLIDS
IPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGTRIG
WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF
SRNNAFLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLI
YLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEIS
FTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKL
IGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVYVWSGLIAITISLLWVAVNPPAGSTQIG
GSFTFP
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaataatcacttcactaacagtcgatctaacctatcaacaaactctgacgct
gctgaagccgtgaggaaccaccagcagcagcagccacctggcgtgacattcgctcgaaga
acatcctctggacgctacgtcaactactcgagagatgacctcgacagcgagctcggaagc
gttgatttcacaaactacacggtccacatccccccgactccagacaaccagcccatggat
ccctccatctctcagaaggtcgaggagcagtacgtgtcaagctccctgttcactggcggc
ttcaacagcgtcactcgtgctcatctcatggacaaggtgattgactccgagaccagccat
ccgcagatggcgggcgctaaaggctcgtcttgtgctattcccggttgcgatgtgaaggtg
atgagtgatgggagaggtcaagatcttctcccttgcgagtgtgatttcaaaatctgtagg
gattgctttgtggacgctgtgaaagcgggcggcgggatgtgtccagggtgtaaggagcct
tacaggaacactgatcttacggatttggctgaggatgggcagcagaagcagcaaaggcct
atgcttccgccgccgtctggtgggtcgaagatggagaggagactgtcgttgatgaagtcg
actaagtctggtttgatgaggagtcaaactggggattttgatcataacaggtggttgttt
gagacgagtgggacttatggttacggtaatgctttttggacgaaagatgggaacttaggt
agtgagaaggatggtcacggtatggggccacaggatctgatgagcagaccgtggagaccg
cttactcggaagctccagattcctgcagctgttattagtccttacaggcttttgatattt
attcgaatagttgttcttgcactgttcttgatgtggaggattaagcaccaaaacccagat
gcagtatggctatggggaatgtctgtggtttgtgagctttggttcgccttttcttggctt
cttgatcagcttccaaagctgtgtcccatcaaccgagctactgatctcaatgttctcaaa
gagaaattcgaaacacctacaccaagcaacccgaccgggaagtctgatctccctggacta
gatatgtttgtgtcaacggcagatccggacaaagagccacctcttgtcacttccaacacc
attttatccatcctcgcagctgactaccctgtggaaaagcttgcttgctacgtttcagac
gatggaggagcgcttctgacgtttgaagccatggccgaagcagcgagttttgcaaacata
tgggttcctttctgtcgtaaacacaatatagaaccgaggaatccggattcgtattttagt
ctgaagagagatccttacaagaacaaggtgaaggctgacttcgttaaggataggaggaag
gtgaagcgcgagtatgatgagtataaggttcggatcaacggcttgcctgactctatcagg
cgacgttctgatgcttatcacgcgagggaagagattaaggcaatgaagcagcagagacag
aacaaagaggatgagattgtagagcctgtcaagattcctaaagctacttggatggctgat
ggtactcattggcctggaacttggttaaactctgctcctgatcattcccgtagtgaccat
gctggtatcattcaggtgatgttgaagcctcctagtgatgagccattacatggagtatcc
gaaggtttcttagatcttacagatgtggacattcgcctccctcttctagtctacgtctcc
cgtgagaaacgaccaggttatgaccacaacaagaaagcaggagcaatgaacgctctcgtc
cgagcttccgcaatcatgtccaacggtccgttcatattaaatctcgactgtgatcattac
atatacaactctcaagctttaagagaaggaatgtgtttcatgatggaccgtggcggcgac
cggctttgctacgttcagttcccgcaaaggttcgaaggcattgacccatctgatcgttac
gcgaatcacaacactgtcttcttcgatgtcaacatgagagctctcgatggtttgatgggt
cctgtctacgtcggaacgggttgtctcttcagaagaatcgccttgtacgggtttgacccg
cctcggtctaaagagcaccatcctggatgctgtagttgctgcttccctcgcaagaagaag
aagaagatccctgaagagaacaggtctttgagaatgggtggtgactctgatgatgatgaa
gagatgaatctttccttggtccccaagaagttcggaaactccacgttccttatagattcg
atccctgtagctgagttccaaggccgtcctctcgctgatcaccccgccgtgcagaacggg
agacccccgggagctctcaccatccctcgtgagcttctcgatgcgtcgacggtggcagaa
gctatagcagtcatctcatgttggtacgaggataaaaccgagtgggggactaggatcggt
tggatctacggatccgtcactgaggacgttgtcactggttatagaatgcataaccgtggc
tggaagtcagtttactgtgtgacgaaacgtgacgctttccgcggcacggctcctatcaac
ttgacggataggctccaccaggttctccgctgggctactggctcagtggagatcttcttc
tcgagaaacaatgccttcttggctagcccgaggatgaagatcctccagagaattgcttac
cttaacgttggaatctatccttttacttcgatcttcctcatcgtctactgcttcctcccc
gcactctcgctcttctcagggcagttcatagtccaaacgctcaacgtcacgttcctcatc
taccttctgataatctcgattactctctgcctgctcgctctcctcgagatcaaatggtca
ggaatctccctcgaggagtggtggaggaacgagcagttctggctcatcggtgggacgagc
gctcatttagccgcggtcatccaagggctgctcaaagtggtggctggaatcgaaatctcg
ttcacgttgacgtctaagtccggaggagacgacgtggacgacgagtttgcggatctctac
atagtgaaatggacgtctctgatgatcccaccgatcaccatcatgatggtgaatttgata
gctattgcggttgggtttagcaggacgatatatagtgtgattccgcagtggagtaagttg
ataggaggagtgtttttcagtttttgggtgttggctcatctttatccgtttgctaaaggg
cttatgggaagaagagggaagactccgaccattgtttatgtttggtcggggcttattgct
atcaccatatctctgctttgggtggctgttaatccacctgctggctctactcaaattgga
ggatctttcactttcccatga
DBGET
integrated database retrieval system
