Brassica rapa (field mustard): 103855405
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Entry
103855405 CDS
T03449
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2
KO
K08775
breast cancer 2 susceptibility protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03440
Homologous recombination
brp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103855405
03460 Fanconi anemia pathway
103855405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103855405
03036 Chromosome and associated proteins [BR:
brp03036
]
103855405
03400 DNA repair and recombination proteins [BR:
brp03400
]
103855405
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103855405
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103855405
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103855405
FA (Fanconi anemia) pathway
Downstream FA components
103855405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
103855405
NCBI-ProteinID:
XP_009130634
LinkDB
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Position
A03:complement(64918..71151)
Genome browser
AA seq
1110 aa
AA seq
DB search
MSTWSLFPDSSGDCFRWEGAGRILQSDSQDYAIESTAPLPSMNDLLLRGWSKLIQGDEAI
LRTGLGNSVALKAKSILEDGHHHPDLHNIGGSSLQVDSAATLPMFRTASGRSVPLKDSSI
AKAISILGPHSDNVPLRESGFGDPNSFFQTASNKKVFVSSAGLSRANALLGLEADDFNGF
NHVKRSNSSHQKRGCSELKTHATGVQHHSETPGQYECHVFEKISDNLYPSAVVPPTMFQT
AGGKTLSVSVQALKRARNLLGDPESGTLFDDVAAGDQFATPQKVQRLVDIAYEGKTSNKH
TATSFVSPLRSSSKKFRSVKLEDLASGGNLIKKFDTAVDETDCALNITKVATHGVSNNRP
LASYMAVNSAKANGFIPIAKQFGQPLVDITNRSANNKQDSTQKKRLGKTIFVSPFKRPRN
SSFKTPLKKNAQHALSGLSIVSSDTLNSKMVLCTRYPQRSPRVYIKDYFRMHPIVTTKMN
YVPDHVRRIKSSNADKYVFRDESSSNMVGAETFFQMLAESGASLQQASRKWVINHYRWIV
WKLACYETCYPVICRGNFLTITNVLEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVL
YISAINPKTDNDSQEALGSGSGNNVKVELSDGWYSMNAALDVKLTKQLNAGKLFVGQKLR
ILGAGLSGWATPTSPLEAVISNTICLLLNINGTYRAHWADRLGFCKEVGVPLAFNCIKGD
GGPVPKTLAGITRIYPILYKERLGERKSIIRSERMESRMTELHNQRRSALVEGLMCEYER
GVNGFHSQNDTDSEEGAKVFKLLETASEPELLMAEMSLEQLTSFTTYKSKFEAAKHIQME
KSVAKALEEAGLSERDVTPFMRIRLVGLTSLSYEGEHNPKEGIVTIWNPTERQRIELTEG
KIYIVKGLVPTISDSETLYLHARGSSSRWEPLSPKASSSFQPFFNPRKPISLSNFGGIPL
SSEFDLAAYVVYVGNVYTGVEQKKQWVFVTDGSTQRSRSGEISNSLLAISFSTPSMDDLP
TPHISHSLVGSVVGFCNLIKKAKDAKNDMWVGEATENSVYSINAEAAYSSHLKTSSSHIQ
TWAKLSSSNSVTYKLRQRVLFIIGASTCSR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggagtttatttcccgattcaagcggcgattgtttccggtgggaaggcgct
ggccggattctccagtcggactcacaagattatgctattgaatccacagctcctctacct
tctatgaacgatctcttgctcagaggatggtcgaagcttatacaaggggatgaagcgatt
ttgaggactgggctggggaactctgtagctctaaaagccaaatctattttagaagatggg
catcatcatccagatttgcacaacataggaggctccagtctccaagtggattcagctgca
actttgcctatgttcaggaccgcctcaggacgttctgtcccattgaaagactcctccatt
gccaaagctatttctattcttggccctcactcagataacgttcctctcagggagagtggg
tttggtgatcccaactcttttttccagacagcttctaacaagaaggtttttgtatcttct
gccggtctgtcaagagccaacgcattgttaggactcgaagcagatgattttaatggattt
aaccacgtgaagcggtccaattcttcccaccagaaacgtgggtgctctgagttaaaaact
catgctacaggggttcagcatcattcagaaactccaggacaatacgagtgccatgtattt
gagaagatatcagataatttatatccatctgcagtagtgccgccaacaatgtttcagact
gctggtggaaaaacgttgtcagtatcagttcaggcattgaaacgtgccagaaaccttctc
ggagaccctgagtcggggactctctttgatgatgtagcagcaggtgatcagtttgctaca
ccacagaaagttcaaaggttagttgatattgcttatgaaggaaagacaagcaacaagcat
acggcaactagttttgtatctcctcttcggtcatcgtcaaagaaattcagatcagtcaaa
ttggaggatctagcttcagggggtaatttgatcaagaaatttgacacggctgttgatgag
acagactgtgctctaaatattactaaagttgctacacatggagtatcaaataacaggccg
ttggcatcatatatggcagtgaatagtgccaaggcaaacggcttcattccaatagctaaa
caatttggccagccacttgttgatataacaaatcgcagtgcaaacaataaacaagacagt
acccaaaagaaaagactgggaaagacaatcttcgtttctccttttaaaaggccaaggaat
tcctccttcaaaactcctttaaagaaaaatgctcagcatgctttaagtggtttgtctatc
gtatcttctgatacacttaattccaaaatggtgctttgtacaagatatccacaaaggtct
ccaagagtatatatcaaggattattttcgaatgcatccaatagttacgactaagatgaac
tatgtgccagaccatgtcagaagaatcaaatcaagtaatgcagataaatatgtattccgt
gatgagtcttcctcaaatatggttggagctgaaacttttttccaaatgttggctgagtct
ggtgcttccctacaacaagcatctagaaagtgggtcattaatcactacagatggatcgtc
tggaaacttgcatgctacgagacatgctacccagtcatatgtagaggaaattttctgact
atcaccaatgttctcgaagaactgaaatacagatatgagcgagaggtcaatcatggtcac
tgctctgcaatcaagaggattctgagtggtgacgctccagcttcttcaatgatggtgctc
tatatatcagctattaatccaaagacggataatgattctcaggaagcacttggttctggc
agtggcaacaatgtgaaagtagagctcagtgatgggtggtactccatgaatgctgccctc
gatgtcaagctgacaaagcagctgaatgctggaaaattgtttgttggacagaagcttcga
atccttggggcaggactttctggctgggctacaccaacatcacctcttgaggcagtgatt
tcaaatacgatttgtttgctgttgaatattaatgggacgtacagagctcactgggcggac
cgactaggattctgtaaagaagttggtgttcctctggccttcaactgtatcaagggcgat
gggggtccagtgcctaaaacgttagctggaatcacacgaatatatcctatcctgtacaag
gaaaggttaggtgaaaggaagtcaattattcgatcagagagaatggaaagtagaatgact
gagctgcataaccagaggcgctcagctcttgttgagggtcttatgtgtgagtacgagaga
ggagtaaatggtttccacagccagaacgacactgacagtgaggaaggagcaaaggtcttt
aagctgttagagactgcttctgaacctgaactcctaatggcagaaatgagtctggagcag
ttgacatctttcactacatataaatcaaaatttgaggcagccaaacacatacagatggaa
aaatcagtggcaaaagctctggaagaagctggcttaagtgaaagggatgtcaccccattc
atgaggattaggcttgttggactgacgagtttaagttatgaaggagaacacaatccaaaa
gaaggcatagtaaccatctggaatccaacggagagacagagaatcgagttgacagagggg
aaaatatacatagtgaaagggctagtaccgacgatatcagattcggaaacactttactta
catgccagagggtctagctcaagatgggagcctttgtctccaaaagcttcttcaagtttt
cagccctttttcaacccccgtaaacccatttctttgtccaattttggtggaattcctctt
tcaagtgaatttgatctcgctgcgtacgttgtatatgttggaaatgtatacacgggtgtt
gagcaaaagaagcagtgggtgtttgtgacagatggatccactcaacgctcacgttcaggg
gaaatctcaaacagtcttcttgctataagcttcagtaccccatccatggatgacttgccc
actccccacatcagccatagtcttgtcggatccgtggtaggattttgtaacctaataaaa
aaagcaaaggatgcgaaaaacgacatgtgggtcggagaggcaacagagaactcagtgtat
tccataaacgcagaagctgcttactcctctcacctcaaaaccagcagttcccatatccaa
acttgggctaagctctcttcttccaactcggtaacctataaacttaggcagagagttcta
tttataatcggtgcttcaacatgctcaaggtga
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