Brassica rapa (field mustard): 103855429
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Entry
103855429 CDS
T03449
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103855429
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103855429
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103855429
Protein phosphatases and associated proteins [BR:
brp01009
]
HAD phosphatases
Fcp/Scp phosphatases
103855429
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103855429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DUF7756
Hydrolase
Motif
Other DBs
NCBI-GeneID:
103855429
NCBI-ProteinID:
XP_009130663
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Position
A03:153555..157906
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AA seq
763 aa
AA seq
DB search
MNRLGQKSVVYHGELRLGELDVKQVSSASGNNEFRFPNDEIRIHHVSPAGERCPPLAILQ
TIASFSVRCKLESSAPVKPPELMRLHAVCFHELKTAVVLLGETEIHLVAMPSKEKKFPCF
WCFSLPLGLYDSCLRMLNTRCLSIVFDLDETLIVAHTMKSFEDRIEALKVWISREVDPVR
IHGMSAELKRFMDDRMLLKQYIDNDYAFDNGVLLKAQREEVRPTSDGLEKVYRPVIRLPE
KNTVLTRINPEIRDTSVLVKLRPAWEELRSYLTANTRKRFEVYVCTMAERDYALEMWRLL
DPEAHLISLKELRDRIVCVKPDAKKSLLNVFKGGICHPKMAMVIDDRVKVWEDKDQPRVH
VVPAYLPYYAPQAETALPVPILCVARNVACNVRGYFFKEFDESLMSSISLVYHEDDVETL
PPSPDVSNYVIIEDPGFASNGNITAPPVIEGMCGGEVERRLNQASAADSSTPATSNAEQK
SETPKPQIAVIPNNASTTTAAALLPSHKPSLLGAPKRDGFTFSDGGRPLMMRPGVDIRNQ
NFNQPPLLSRIPMQPPSSSMHPQGGWLVDDENRAPFPGRPAGGYSNQLPHGIQGSAPVTN
PSHLRSEELCVDDDLKRQNASRQPTEGGIPQSQLVSNGGEHHADSGKSNGGQSHLFVSAL
QEIGRRCGSKVEFRTVMSTNRELQFSVEVLFTGEKIGIGMAKTKKEAHQQAAENALRSLA
EKYVAYVSPIAGETEKGSKNENGFLWENNEAVGNEGLEEEEAT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttaggtcagaaatcggtggtctaccacggagagttgcgtctgggggagctt
gatgtgaagcaggtctcttccgcctccggcaacaacgaatttcgcttccctaacgacgag
attcgaatccaccacgtttctcctgccggcgagaggtgtcctccgctcgccattctccag
actatcgcttctttctccgttcgatgcaagctcgagtcctccgctccggtcaaacctccc
gagttgatgcgtcttcacgccgtctgtttccatgaattgaagactgcggtggtattgctg
ggagaaacggagattcatttagtggcgatgccgagcaaggagaagaagttcccttgtttc
tggtgtttctcactccctttaggtctctacgattcctgtttaaggatgctcaacactcgc
tgtctctctattgtctttgatcttgacgagactctcattgttgcccataccatgaagtcc
tttgaggatcgcatcgaagctctcaaggtttggatctcccgggaggttgatcctgtcagg
attcatggaatgtccgctgagcttaaaaggtttatggatgataggatgctcctcaagcag
tatattgataatgactatgcttttgataacggtgttttgctcaaggctcagcgtgaggag
gtccgccctacttctgacggcctcgagaaagtttatagacctgtcattagattgcctgaa
aagaataccgttcttactcggatcaatcctgagatccgtgacactagtgtgcttgtaaaa
cttagaccagcgtgggaggagttaaggagctatttgacagcaaacactaggaaacgcttt
gaagtttatgtttgtaccatggctgaaagggactatgctttggaaatgtggagattactc
gatccggaagcgcacctgataagcctcaaggagcttcgagatcgtattgtatgcgttaaa
ccagatgccaagaaatcgttgttaaatgtcttcaaaggtggcatatgccaccctaaaatg
gcaatggttattgatgatcgtgttaaggtttgggaggacaaggatcaaccacgggttcat
gttgttcctgcatatcttccatattatgctccacaggcagagacagcccttcccgttcca
attctttgcgtagcaagaaatgttgcatgcaatgtcagaggttactttttcaaggaattt
gacgagagtttaatgagtagtatatctttggtttaccatgaagatgatgtggaaacttta
cccccttcaccggatgtgagcaactatgtcattatagaggatcctggctttgcctcaaat
ggaaacataactgctcctccagttatcgaaggaatgtgtgggggtgaagtggaacgcaga
ctaaaccaagcgtctgcagctgattcttctactcctgcaacgagtaacgctgagcagaaa
tctgaaacccccaagccgcagatagcagttataccaaataacgctagcacaacaactgca
gcagcattgttaccttctcataaacctagtttgcttggagctcctaaacgagatggcttc
actttttctgatggtggaagacctcttatgatgaggcctggtgttgatataagaaaccag
aacttcaatcagcctcctcttctgtctcgaattcctatgcaaccaccttcgtcttctatg
catcctcagggtggttggttggtagatgacgagaaccgagctccttttcctggtcgacct
gcaggaggttattcaaatcagcttcctcatggtatacaaggttctgctcctgtcaccaac
ccatcccacttgaggagcgaagagttatgtgtggatgatgacctcaaaaggcaaaatgct
tcacgtcaaccaacagaagggggaatcccccagagtcaactggtgtcaaatggtggagaa
catcatgcagatagtggaaagagtaatggtgggcagtctcacttatttgtgagtgcactg
caggaaattggaagaagatgcggttcaaaggtggagtttaggactgtgatgagtaccaac
agagagttacagttttcagttgaggttttgttcacgggggagaagattggcattgggatg
gcaaaaactaaaaaggaagcacatcaacaagcggctgagaatgctcttcggagcttggct
gaaaaatatgttgcttatgtctcacctattgctggagaaacagagaaaggttccaaaaat
gaaaatgggtttttgtgggaaaacaatgaagctgtagggaacgaagggcttgaagaagaa
gaagccacctga
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