Brassica rapa (field mustard): 103855495
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Entry
103855495 CDS
T03449
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103855495
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103855495
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
DUF7128
C2HC_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
103855495
NCBI-ProteinID:
XP_009130730
UniProt:
M4CNF3
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Position
A03:complement(396168..399631)
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AA seq
504 aa
AA seq
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MQMIPGDPFSISSSMGGFVHQEQHIHHLQQHIPELNPNSNSNPSAKPNSSSAKKKRNQPG
NPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMNSLSNNPAISTTTSLNFANDSHV
INNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSEMHTQGSSEMVQMASTGNHHLFPL
SSSSFLSDFSDHHYNQQFEIPTTSTNPNLTLSSSSTSQQTSASLPSLHQQHQTLKDSSFS
PLFSSSSDKKQNKPLSPMSATALLQKAAQMGSTRSNSTTVPSLFAGPTMASSSSAASPPR
SSSPMTIQQQLNNFNHNLAPPTSGVTTSSVDNNNPFQSNRSGLNPAQQMGLTRDFLGVSN
ENHPHQTGRHPFLPQELARFAPLG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttccatgggaggctttgtccat
caagaacagcatattcatcatcttcagcagcacatccctgaacttaaccctaattccaac
tcaaaccctagtgcaaaaccaaattcgtcatcagccaagaagaagagaaatcaacctggc
aacccagatccagatgcggatgtcatcgctctatcgccaacaaccctcatggcgacaaac
agattcgtctgcgagatctgcaacaaagggtttcaaagggatcagaacttacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtccaacaaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcctctagggccctt
ggagacctcactgggatcaagaagcactatagccgcaagcacggggaaaagaagtataag
tgcgaaaaatgttctaagaaatatgctgttcaatctgattggaaggcgcacgcgaaaact
tgtggcactcgtgagtataagtgcgactgtggcacgttgttctccaggaaagatagtttc
atcacacacagagcgttctgcgacgcattaacagaagaaggagcgagaatgaactcactt
agtaacaatccggcgatctctacaacaacaagtcttaattttgcaaatgattcacatgtt
ataaataatccaaatcttccccatggatttgtccaccgaggagttcatcatccagacatt
aatgcagctatctctcaatttggtttagggtttggacatgacctaagcgaaatgcatacg
caaggttcatccgaaatggtacaaatggcctccaccgggaaccaccacctcttccccttg
tcttcatcatcattcctctctgatttctcggaccaccactacaaccaacagttcgaaatt
cccacgacttccacaaaccctaatctcaccttatcatcatcctcaacatcacaacaaacc
tcagcttcactcccatcactacatcaacaacaccaaaccctgaaagactcttctttctcc
ccactcttctcctcctcctccgacaaaaaacaaaacaagcctctttctccaatgtctgcc
actgctctcttgcaaaaagctgcacaaatgggatccactagaagcaactccaccaccgtt
ccgtccttattcgccggcccaacaatggcttcatcctcgtctgccgcttctcctcctcga
tcatcttctccaatgacgatccaacaacaactcaacaacttcaaccacaatcttgctcct
cctaccagtggtgtaaccacgagtagtgtcgataataataatccatttcaatcaaatcgg
tcaggtttaaacccggctcaacagatgggtttaacccgggattttcttggagtgagcaac
gagaatcaccctcaccaaacgggtcgccatccgtttttgcctcaagaactcgcaaggttt
gctccattgggttga
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