Brassica rapa (field mustard): 103855628
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Entry
103855628 CDS
T03449
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1 isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
103855628
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
103855628
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
103855628
NCBI-ProteinID:
XP_009130884
UniProt:
M4CNR6
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All DBs
Position
A03:948481..951618
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AA seq
680 aa
AA seq
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MSISKDETMLAPLPPFDPTKPSTPISFPIKTLQDLASRSYFDSFHFPFNRSSVSLRQNIG
SLPDRSRLLVCHDMKGGYVDDKWVQGCGNNKGFAIWNWYLMDVFVYFAHSLVTLPPPCWT
NTAHRHGVKVLGTFITEWDEGKATCKELLATKESAQMYAERLAELAAALGFDGWLINIEN
VIDKVQIPNLKTFVSHLTKVMHSSVPGSLVIWYDSVTVEGRLAWQDQLNEMNKPFFDICD
GIFMNYTWKENYPKASAKIAGERKHDVYMGIDVFGRGTFGGGQWKANVALDLLKSSDVSA
ALFAPGWVYETNQPPDYHTAQNKWWSLVEKSWGIVQTYPQSLPFYSDFNQGLGSHVSLQG
QKLSDAPWYNISCQSLQPLLEFNEGNKSEAMQVMVDGREASYNGGGNISFKGTLKRNAHY
TTRLFKPNLKLSGSHISVSYSVKSDERSMLGLLLRFSTPSQETKSLIMAPNEYMHRFGDM
FLPCLRRTTSDWTVHETNLLMDGHTLTEISALCYGPDDLAEETNTQGYSALLGHISIKSQ
QKTKPFPPASAWVVEAHNIEIVPGDSGSRTLNCKLQWRLKHPEEDSVFTRYNVYAEKLNS
SDDKSRKVMEEPRSEKVFLGTAHVDAYYISDMVVGPDVKKVKFVIQTCGEDGSWQELDAS
PNILVEAERLSSKLCCCGLI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatccaaagacgaaactatgctagctccacttccacctttcgatcccactaag
ccatccacaccaatctcatttcctatcaaaactctccaagacttggcgtctcggtcttac
ttcgactcctttcacttcccctttaaccgctcctcagtctctctccgacagaacatcggt
tccttgcctgaccgatccaggcttcttgtttgtcacgacatgaaaggagggtacgttgac
gacaagtgggtacaagggtgtggaaacaacaaaggtttcgcgatctggaactggtacttg
atggacgtttttgtctactttgctcactctctcgtcactctccctcctccttgctggacc
aacactgctcacagacacggcgtcaaggtactggggactttcatcactgaatgggacgaa
gggaaagctacttgcaaggagttgttggcgaccaaggagtctgcgcagatgtatgcagag
cgcttagcagaacttgctgctgctctaggctttgatgggtggctgattaatatagagaat
gtaatagataaagtccagattccaaatttgaagacttttgttagtcatcttacaaaagtc
atgcattcatctgtacccgggagtttagttatatggtatgatagtgtcactgttgagggc
agacttgcttggcaagaccagttgaatgaaatgaacaagcctttctttgatatatgtgat
ggaatattcatgaactatacatggaaggagaactacccaaaagcatcagctaagattgct
ggtgagagaaaacatgatgtctacatgggaatagatgtgtttggtaggggcactttcggt
ggtggccagtggaaggcaaatgttgcacttgatttgctgaagagcagcgatgtatcagct
gctctatttgctcctggatgggtgtatgagaccaatcaaccaccagattatcataccgca
caaaacaaatggtggtcacttgttgagaagtcatggggaatagttcaaacatatccacaa
tctttacccttctactcagattttaatcagggacttggttctcatgtttctctccaaggt
cagaaactatcagatgctccctggtacaacatttcttgccaaagtctgcagccactctta
gaattcaatgaaggaaacaagtcagaggccatgcaggtcatggttgatggtagagaagca
tcatataacggaggagggaacattagtttcaaaggaacactaaagagaaatgcacattac
acaacaagactattcaaacctaacctaaagctttctggttctcacatctctgtctcctac
tctgtgaaatcagatgaaagatctatgctaggccttctcctccgtttttcaactccttca
caggagacaaagtccttaatcatggctccaaatgaatacatgcacagatttggtgacatg
ttcctgccatgcctaagaaggaccacatcggactggacagtgcacgaaacaaaccttctt
atggatggacacacactgactgagatctctgccttgtgctacggtccagatgatcttgca
gaagaaacaaacacacaaggatactctgctttgcttggccatatctctatcaagtcccag
cagaaaaccaaacctttccccccagcttcagcatgggttgtcgaggctcataacatagag
attgtaccgggtgattccggctccaggactttgaattgtaagctgcaatggaggttgaag
catcctgaggaggattctgtgtttacaaggtacaatgtgtatgcggagaagctgaattca
agtgatgacaagtcaaggaaggtaatggaagaaccaagaagcgagaaagtgtttcttgga
acggctcatgttgatgcttattatatttctgatatggtggttggacccgatgtgaagaaa
gtcaagtttgtgattcagacctgtggtgaagatggttcatggcaggagctggatgcttcc
ccaaacattctggttgaggcagagcgtctcagttcaaagctttgttgctgtgggttgatt
tga
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