Brassica rapa (field mustard): 103855748
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Entry
103855748 CDS
T03449
Name
(RefSeq) SNAP25 homologous protein SNAP33 isoform X1
KO
K08509
synaptosomal-associated protein 29
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103855748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103855748
Membrane trafficking [BR:
brp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103855748
SNARE
SNAP-25 (Qb,c)
SNAP-29
103855748
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
V-SNARE_C
DUF5089
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
103855748
NCBI-ProteinID:
XP_009131020
UniProt:
M4CP20
LinkDB
All DBs
Position
A03:complement(1427146..1429128)
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AA seq
294 aa
AA seq
DB search
MFGLKQPKPAGSGPSGSNPFDSDDDTLKPSNRINPEPSLAAKNLSLNSFDDDDCDEKRFT
TSSKPSLDLDAKSRYRNGFRDSGGVENQSVQELESYAVYKSQETTKTVQGCLKVAEEIRS
DAARTLVMLNEQGEKITRTHHKTVDIDHDLSRGEKLLGSLAGIFSPTWKPKKTRSITGPV
ITKGESPKRRVNHLETREKLGLNHLPKPQSRTHEPLPESADAYQKLEMEKAKQDDGLADL
SDLLSELKNMAVDMGTEIERQNNGLDHLQDDVDELNFRVKQSNQRARRLLRKIL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtttgaagcaaccaaagccggctggttctgggccttctggctcgaatcctttt
gattcggatgatgacaccttaaagccatcaaataggattaaccctgaaccttctctagcc
gctaagaatctcagcttaaactcttttgatgatgatgattgtgatgagaagagattcact
acttcttctaaaccctctttggatctggatgcaaagagccggtacaggaacggttttcgt
gattctggaggtgttgagaaccagagtgttcaggaacttgagagctatgctgtgtacaag
tctcaggaaacaaccaaaaccgtacaagggtgtctgaaagtagcagaggagatcagatca
gatgctgccaggactctggtcatgttgaatgagcaaggagagaagatcacaaggacgcac
cacaagactgttgacatcgatcatgatctcagtcggggtgagaaacttcttggaagcctc
gctggcattttttcaccgacttggaagccaaagaagactcgttccataactggtcctgtt
ataactaaaggtgaatcacccaagaggagagttaaccacttggaaaccagagagaagctg
gggttgaaccatttgcccaaaccacaatcaagaacccatgaaccgctccctgaatccgct
gatgcctatcagaaactagagatggagaaagcaaagcaggacgatggacttgcagatttg
agtgatctactcagcgaactgaagaacatggctgttgatatgggaactgaaatcgaaagg
caaaacaatggacttgatcatcttcaagacgatgtcgacgagcttaacttcagagtgaaa
caatctaaccaacgagctcgccgtttactccgcaaaatcctctga
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