Brassica rapa (field mustard): 103856013
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Entry
103856013 CDS
T03449
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.15
KO
K14487
auxin responsive GH3 gene family
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103856013
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
103856013
NCBI-ProteinID:
XP_009131333
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Position
A03:2512308..2515282
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AA seq
593 aa
AA seq
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MLPKFDPTNSKACLSILEDVTTNAKQVQDSVLEAILSRNAQTEYLKGFLNGQLDKQSFKN
NLPVVTYEDYRPYIDRIANGESSDLICDQPIIVLLVSSGTSGGVPKLIPMTAEELEQRML
FSSLHRPLISKQIEGISEGKSLSFFFVTREGKTASGLMVRTMVTCVIKMAGSANKDVWDQ
VQISPHGLYTCDDTTQSMYCQLLCGLLQRENVSRLGAPFASSFLKVIKFLEDHWKELCSN
ITTGRVSDWITDPQCLSGVGKFLGAPNPELASLIEKECGKTSWEAIVRRLWPNAKCIEAV
VTGSMAQYIPMMDFYCGGLPLVSSFYASSECFLGLNLNTLRKPSDAAYTIIPSMAYFEFI
EVEKDHQETSHDPTKNIVDLVDVKVGHDYEPVITTFSGLYRYRLGDVLRVTGFYNNAPEF
QVAGRKKVVLSIDMDKTYEEDLLKAVTNAKLLLEPHDLMLIDFTSRVDSSSFPGHYVLYW
ELGSKVNDAKLEPDAEVMEECCFTMEESLDSIYRKGRKNDKNIGPLEIKVVKSGAFDELM
NFFVSRGSSVSQYKTPRSVTNEEALKVLEASVVSKFVSKKTPSWELHELHSSR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaagttcgatccaacaaactcaaaagcgtgcctgtccattcttgaggatgtg
acaaccaacgcaaagcaggttcaagattccgtgttggaagcaatactttcacgcaatgct
caaaccgagtatcttaaaggcttcctcaacggtcagctcgataagcaaagcttcaagaac
aacctacccgttgtgacctacgaagactatagaccttatattgatcgtattgccaatgga
gagtcctctgatctcatctgtgatcaacccatcattgttcttttggtcagctcaggtact
tcaggaggagttccaaagttgatacctatgacagcagaggaactagaacagaggatgttg
ttttcatctctacatagacctctcatctccaagcaaatagaagggattagtgaaggaaaa
tctctcagctttttctttgttaccagagaaggcaagacagcctctggcttgatggtcagg
actatggttacttgtgttataaaaatggccggctcagccaacaaagatgtctgggatcaa
gtacagataagcccacatggcctttatacttgtgacgacactacccaaagcatgtactgc
caattgctttgtggacttctacagcgagaaaatgtatctcgccttggtgcaccatttgct
tcttcctttctcaaagtaatcaagttcttggaagatcactggaaggagttatgctccaac
ataacgacaggtcgtgtcagcgactggatcacagaccctcaatgcctttcaggggttggt
aagttcctcggcgctccaaatccagaactagcgagcctaatcgagaaagaatgtggtaaa
acatcatgggaggcaatagtgaggagactatggcctaatgcaaaatgcattgaagccgtt
gttactggctctatggcacagtatataccgatgatggatttctattgcggcggtcttcct
ttagtttcatcattctatgccagctctgaatgtttcctaggtcttaacttaaatactctg
agaaagcctagtgatgcggcctacaccattatcccaagtatggcatattttgagttcata
gaggtcgagaaagaccatcaagaaactagtcatgatcccacaaagaacattgtggatctt
gttgatgttaaagttggacatgactatgaacctgttataacaaccttttcaggtctgtat
agataccgtttgggtgatgttttacgtgtgactggtttctacaacaacgcgccagagttt
caagtcgcgggaagaaaaaaagttgtcctgagcatcgacatggacaagacctacgaagaa
gatctcctcaaagccgtaacaaacgcaaagctcctcctcgagccacatgacctaatgctc
attgacttcactagccgtgtggattcctcttcatttccaggacactacgtgctctactgg
gaactagggagcaaagtcaatgacgcaaagcttgagcctgacgctgaggttatggaggaa
tgctgcttcaccatggaggagtctctcgactctatttatagaaaaggacgtaagaatgat
aagaacattggaccgcttgagattaaggttgtcaagagtggtgcctttgatgagcttatg
aacttctttgtgtctcgaggctcttctgtgagtcagtacaagacgccgagatcagtgacg
aatgaagaagcgttgaaggtgttagaggcgagtgtagtttccaagtttgttagcaagaag
actccgtcttgggagctacatgagctgcattccagtcgataa
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