Brassica rapa (field mustard): 103856035
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Entry
103856035 CDS
T03449
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103856035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103856035
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
103856035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_RIG_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_VPS8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
103856035
NCBI-ProteinID:
XP_009131364
UniProt:
A0A3P5ZF00
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Position
A03:complement(2622973..2625905)
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AA seq
486 aa
AA seq
DB search
MESPQKTKTGLNLPAGMNQTSLRLETFSSSFRGISTLSSPSKSTCSDRFIPCRSSSRLHA
FDLQDKEPTTPVKEGGNEAYSRLLKSELFGSDFVSNSLSPAGGGGGQGGSASSPMSPCTS
NMLRFKTDRSNSSPCSPFSPSILGNDNGLSSDSSPPPKPPRKVPKTPHKVLDAPSLQDDF
YLNVVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDSVCSLQWTREGSYISVGTS
HGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLV
GHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPIHKLTEHTAAVKAITWSPHQSSL
LASGGGTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKY
PSMAKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVRDTGLWSL
GRTQIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaatccccacagaaaaccaaaaccggtttaaacctccccgcggggatgaaccagacc
tctttacgtctcgagacgttctcgagctcgttccgcgggatctcgaccttatcctccccc
tcaaaatccacctgcagcgacagattcatcccctgcagatcctcatcgcgtctccacgct
ttcgatctgcaggacaaggagccgacgacgccggtgaaagagggagggaacgaagcgtac
tcgagactcttgaaatctgagcttttcggatctgatttcgtttctaactctttgtctcct
gcaggtggtggtggtggtcaaggaggatctgcttcttctccgatgagtccgtgtactagt
aacatgttgaggttcaagacggatcgttccaactcgagtccttgttcgccgttctctcct
tcgattctgggaaacgataatggtctctctagtgattcgtctcctcctcctaagccgcct
cgcaaggttcctaaaacgcctcacaaggtgttggatgctccttcattacaagatgacttc
tacttgaacgttgtggactggagctcacagaatgttcttgcggttgggcttggtacttgt
gtctatctctggtctgcttccaatagcaaagtgacgaagctatgtgacttggggcctaat
gatagcgtgtgttcgcttcagtggacacgtgagggttcatatatatctgttggtacaagt
cacggtcaagttcaggtttgggatggaacacagtgcaagagagtcagaacaatgggaggt
catcaaacgagaactggtgtcttggcatggaactcgaggatcttatcctcagggagcaga
gacagaaacatcctccaacatgatatccgagtccagagcgactacgtcagcaagctcgtg
ggacacaaatctgaagtctgcgggctgaaatggtctcatgatgatagagagcttgcgtct
ggaggcaacgataatcagttattagtatggaacaatcattcacaacaacctattcataag
ctgactgagcatacagcagcggttaaggcgattacatggtctcctcatcagagcagtctc
cttgcttcaggaggtggaaccgcagacagatgcattagattctggaacaccacaaacgga
catcagttgaacagcattgacactggaagccaagtctgcaatctggcgtggagcaagaat
gtcaatgagatagtgagcactcatggatactctcagaaccaaatcatgctctggaagtat
ccatccatggcaaaggttgcaacgcttacagggcacagtatgagagtactatacttggct
acatcacctgatggacagactatagtgactggagcaggagatgagaccctacggttttgg
aatgtcttcccttcagtgaaaatgcagacaccggtgagggacacaggcctctggtcatta
gggaggacacagatccgataa
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