Brassica rapa (field mustard): 103856039
Help
Entry
103856039 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC103856039
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103856039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103856039
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
103856039
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103856039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
zf-CCHC_2
zf-CCHC
zf-CCHC_5
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
103856039
NCBI-ProteinID:
XP_009131368
LinkDB
All DBs
Position
A03:complement(2634024..2636042)
Genome browser
AA seq
404 aa
AA seq
DB search
MGHINEQIIGLQKPITISSRPITTSLRNETEVGCRRRVRDDGMQTGNCFRCRRTGHWISD
CPLKSNADDDPPPPSIHCPCGGGLCETKLSNTHENPGRRFYKCPAAQKCTFFKWCDKATD
EDIRFRPAFTIPDCPCGSGPCRRVVADSGRAYLQCGVKKGFGACGFFKWVDDVEVRCDAA
DEIGFWEEADLVLSDVESSFLAAAAGVPENTEDNSSVSDVHSAPAAVNQGILMSDPVVIE
QLHGDCALSKRSVEEEATSGLGRDTVSNGSVAKREMICYEQPVEEAEWSFPDLDDLMEQY
NSEKLQLESVSAKHAQVLSEFMSSYSRLRLLHEKTGNLRKLLLETEKEMACCEAEALELG
ASCREVAGEMAEAQNRMQVMAAILGDEVELLKQKEFVGRKRRRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggccacatcaacgagcaaatcattgggcttcaaaaaccaattaccataagctcaagg
cccataacaacatcattgagaaatgagacggaggttggatgtcgccgacgagtgcgtgac
gacgggatgcaaaccggcaactgcttccgctgccgtcgaaccggccactggatcagcgac
tgccctctcaaatccaacgccgacgacgatcctcctccaccgtcgatccactgcccttgc
ggcggaggtctctgcgaaaccaagctctcgaacactcacgagaatcccggaagaagattc
tacaaatgccctgctgctcagaagtgcactttcttcaagtggtgtgacaaagcaaccgac
gaagatatcagattccgccccgccttcaccatccccgattgcccctgcggctctggacct
tgccggagagtcgtggctgattctggacgagcttacttgcaatgtggcgtcaaaaagggt
tttggggcttgtggattcttcaaatgggtggatgatgttgaggtgaggtgtgatgcagct
gatgagattggtttctgggaggaagctgatcttgttttgagcgatgtggagagcagcttc
ctggctgctgctgctggtgtaccggagaatacagaggataactcttctgtttctgatgta
cattctgctcctgctgctgtgaaccaaggtatccttatgtctgatccggttgtgattgag
caactacatggtgattgtgctctttccaagcgtagtgtggaggaagaagcaacgagtggt
ttgggaagagatacggtctctaatggttccgttgcgaaacgtgagatgatatgctatgag
caacctgttgaagaagctgagtggtcattccccgatttggatgacctaatggagcagtac
aactcagagaagcttcagctggagagtgtttcagcgaaacatgcacaagtgttgagtgag
tttatgagttcatacagtcggttaaggttacttcatgagaaaactggtaatctgaggaaa
ctgttgcttgagacggagaaggagatggcttgttgtgaggccgaggcattggagcttgga
gcgagttgccgggaagtggctggagagatggctgaggctcagaataggatgcaggtgatg
gcagcgatactaggagatgaagtggaattgttgaagcagaaagagtttgttggtaggaag
agaagaagatgttaa
DBGET
integrated database retrieval system
