Brassica rapa (field mustard): 103856086
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Entry
103856086 CDS
T03449
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103856086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103856086
03016 Transfer RNA biogenesis [BR:
brp03016
]
103856086
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103856086
Messenger RNA biogenesis [BR:
brp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103856086
Transfer RNA biogenesis [BR:
brp03016
]
Prokaryotic type
tRNA degradation factors
103856086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
Urease_gamma
Motif
Other DBs
NCBI-GeneID:
103856086
NCBI-ProteinID:
XP_009131416
UniProt:
M4CPX2
LinkDB
All DBs
Position
A03:complement(2784369..2789863)
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AA seq
963 aa
AA seq
DB search
MSLIVSRARSTPLPNLLAWRALGFRTICSGRLGLAPSSPYTPAPAGTKILESFKEEFEVG
SGVITLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKLYAQGLI
PNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMASVLSLDGKQDPDILAANA
ASAALMLSDVPWGGPIGVIRLGRIDGQIVVNPTMDELSSSDLSLIYACTRDKTMMIDVQS
REITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVADLAATR
IESIFTDPSKGKFERGEALDDIGKDVIKVFEDEGDQESLSILPKAVDTVRKKVVRSRMIS
DGFRVDGRHLDEVRPISCESHHLPATHGSALFSRGDTQVLCAVTLGAPGDAQNLDSIAGP
PKKRFMLHYSFPPFCTNEVGKKGGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEV
MASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGL
EDHLGDMDFKIAGTRSGVTAIQLDIKPAGIPLDIVCESLENAREARLQILDHMEREINSP
RAQDGTYSPRLATLKYTNDALRSLIGPMAALKRKIEEETGARLYFDDGTLTIVAKNQAVM
DKAQEKVDFIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSYEPVSKVSD
VLHIGKYITMMCIDTDVRGNIKLSLKALLPKPEPKSASGPEKVPVVKETVSVETSSFGET
VASLPSVVEPPQKSKLAVPAVVIRTAVECDELEKSYPVDKNTKPKRTAALKPDRKLKSTA
SKQTVTQKEEEVFKSIGPEETVISCGETLKKPPRKKKQSGDEAGESASVSARKLKIGTEM
TAKVHQVRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDALQVKCTSFTTKGIPVMALVDD
EEL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgatcgtgagccgagctaggtctactcctctgcccaatctactcgcatggcgt
gccttaggtttccgcaccatctgctccggccgcctgggcttggcgccgtctagtccatac
acgccggcgccggcgggaaccaaaatactggaatctttcaaggaggaattcgaagtcgga
tccggagtgatcactctcgagacggggaaaatcgcacgcttcgccaacggttcggtggtg
ctcggcatggacgagaccaaagtcctctccaccgttacttgtgccaagtccaaatctcct
ggagacttcttgcctctcactgttgactatcaagagaagctatacgctcaaggcttgatt
ccgaacacgtatatgcggagagaaggtgcaccaaaggagagggagcttttatgtggccgg
ctcattgataggcctatcagaccgttgtttccttcagggttttaccatgaagttcagata
atggcaagtgttctgtcattagatgggaagcaggatcctgatatactggcagctaatgcg
gcatcggctgcgcttatgctatcggatgttccatggggagggcctattggagtcatcaga
ttaggaaggatcgatgggcaaattgttgttaatccaactatggatgagcttagctcaagt
gatctcagtttgatatacgcttgcacaagggataagactatgatgatcgatgttcaatcc
cgtgaaattacggaaaaggatctagcagctgctctgaggctagctcatccagaggctgtt
aagtacatcgatccccaaataagactggcagctaaagctgggaaacaaaagaaagagtac
aaattgtccatgctctctgagaaaactttagaaaaagtggctgacttggctgcaactcgt
atcgaatccatttttacggacccttcaaagggaaagtttgaacgtggagaagctctagat
gacattggaaaagatgtgataaaagtatttgaagacgagggagatcaagaaagcttgagc
atccttccaaaggctgttgacactgtgaggaagaaggtagttcgttcaaggatgatatca
gacggatttcgagtcgacgggagacatcttgatgaagttaggcccatctcttgcgaatcg
catcacctacccgcaactcatggttcagccctcttctcacgtggagatacacaggtgctt
tgtgctgttacacttggagccccaggagatgctcaaaacttggattctattgctggcccc
ccgaaaaagagatttatgcttcactactcctttcctccgttttgtacaaatgaagtcggg
aaaaaaggaggccttaacaggcgtgaagttggccacggaacacttgctgagaaagcattg
cttgctgtcatgccacctgaagaggattttccttacactgttcgcataaattcagaagtg
atggcctcagatggctccacgtctatggcaagcgtttgtggaggtagcatggctttaatg
gatgccgggattcctctacgagctcatgttgcaggtgtctccgttggtcttgtcactgac
gttgacccatcaagtggagaaatcaaagactaccggatagtaactgatatattgggtttg
gaagatcatcttggagatatggatttcaagattgccgggacacgaagtggtgtgaccgca
attcagttggatatcaagccagctggaataccattggacattgtctgtgaatccttagaa
aatgctcgtgaagcccgtcttcagattcttgatcatatggagagagaaatcaactcccca
cgagcccaggatgggacttattcccctcggctagcaactttgaagtacaccaacgatgca
cttcgtagcttgatcggacctatggccgctctcaagagaaagattgaagaggaaacaggt
gcaagattgtattttgatgatggaacattaactatagtcgccaagaaccaggctgtgatg
gataaggctcaagaaaaggttgacttcatcattggtcgtgaaatagttgttggtggtgtg
tacaaaggcacagtgacatctataaaagagtacggcgcatttgttgagttcaacggtggt
caacaaggcctcctacacatgtctgagttatcttatgaaccagtctccaaggtctcagat
gtattacatattggcaagtacatcactatgatgtgcattgacaccgatgtccgcggtaac
attaagttatctctcaaggcgctgttacccaaacctgaacccaaatcagcatctggtcct
gaaaaagtccctgtggtgaaagagacagtctctgtagaaacgtctagttttggagagacg
gttgcaagtctgcccagtgtcgtagagccacctcagaagtctaaattagcagttcctgca
gttgtaatccgcactgctgtggagtgtgatgagctagagaagtcttatcctgtggacaag
aacactaaacctaaacgcactgcggctctgaagccagaccggaaactcaaatcaactgcc
tctaagcagactgtgacacagaaggaagaggaggtattcaaatccattggtccagaagaa
actgtgatcagctgtggtgagacactgaagaaacctcctaggaagaagaaacaatcaggg
gacgaggctggagagagtgcctcggttagtgctcggaaactgaagataggaacagagatg
acagccaaagtccaccaggttcgaacgcatggattggttcttgatttaggtggtggaatc
cgcgggatgtacaaatttgagggcgatgaggagacagagtttgagattggagacgcgttg
caggtgaaatgtacaagttttactactaaaggaatccctgtaatggctttggttgatgac
gaggagctttag
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