Brassica rapa (field mustard): 103856159
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Entry
103856159 CDS
T03449
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103856159
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
103856159
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103856159
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
103856159
NCBI-ProteinID:
XP_009131492
LinkDB
All DBs
Position
A03:complement(3027215..3030126)
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AA seq
535 aa
AA seq
DB search
MCKTDKFLYHRKLWEMKVRLLGETKVEKLRNSFVSRSRMSLWMIRAVTILLLWSCFVHLM
ALGEMWGPRLFKGWPSCFSQHDLSTVEEMGSLPAKISLPPKRVYQNNGYLMVSCNGGLNQ
MRAAICDMVTVARFMNVTLIVPELDKTSFWNDPRCVCHHFKLLLELCFYFPLLNLFLLWG
SEFKDIFDVDHFITSLRDEVRILKELPPRLKKRVELGMHHEMPPISWSNMSYYQNQILPL
VKKHKVLHLNKTDSRLANNGLPVEVQKLRCRVNFNGLKFTPQIEELGRRVVNILREKGPF
LVLHLRYEMDMLAFSGCSHGCNPEEEEELTRMRYAYPWWKEKVINSEVKRKEGLCPLTPE
ETALTLTALGIDRNVQLYIAAGEIYGGERRMKALTDAFPNVVRKETLLDSSDLDFCRNHS
SQMAALDYLVAVESDIFVPTNDGNMARVVEGHRRFLGFKKTIQLNRKFLVKLIDEYTEGL
LTWDVFSSMVKAFHSTRMGSPKRRLVIPNKPKEEDYFYANPQECLQLLDEPLRVI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaacggacaagtttctttaccacaggaaactctgggagatgaaagttaggctt
ttaggagagaccaaggttgagaaacttaggaactcctttgtctccaggtctcgtatgagc
ctgtggatgattcgtgctgttaccatattgttgctctggagctgtttcgttcatttgatg
gctttgggagagatgtgggggcctagattgttcaaaggttggccgtcttgtttcagtcaa
catgatctgtccacggttgaagagatggggtctcttcctgctaagatctcccttccgcct
aaaagggtatatcagaacaatggttatcttatggtttcatgtaatggaggactcaatcaa
atgcgagcagctatatgcgatatggtaactgttgcaagattcatgaatgtcacacttatt
gtgcctgagcttgacaagacctctttttggaacgatccaaggtgtgtttgtcatcacttt
aagcttcttcttgagctctgtttttattttcctctcttaaatttgtttcttctttggggc
agtgagtttaaagacatattcgatgtggatcacttcataacttcgttaagagatgaagtt
cgtatactaaaagagttgcctccaaggcttaagaaaagagttgagcttggaatgcaccac
gaaatgcctcctattagttggtcaaacatgtcttactaccaaaaccagattcttccactg
gtaaagaagcataaggtgctacaccttaacaaaacagactcacggctcgctaataatgga
ctgcctgtggaggtccagaagctgaggtgcagagtgaatttcaacgggcttaagtttact
cctcaaattgaagaattaggtagacgggtagtcaatattctgagagagaaaggtcccttt
ctcgtcctgcatctcagatacgagatggatatgttagcattttccggttgctcacatggt
tgcaaccctgaggaagaagaagaactaacaagaatgagatatgcttatccatggtggaaa
gagaaagtcataaactctgaggtgaagaggaaagaaggcctttgtccgttaactcctgag
gaaactgctctcacgctgactgcgttaggcattgaccgtaacgttcaactttacatagct
gctggtgaaatctacggtggtgagaggcggatgaaggctttaacagacgcttttccaaat
gtggtccggaaagaaacattacttgattcctctgatcttgatttttgtcggaaccattca
tctcaaatggctgcacttgattacctagtggctgttgagagcgatatatttgttccaact
aatgatgggaacatggcaagagtcgttgaaggtcatcgcaggttcttgggatttaagaag
acaattcagctgaataggaagttcctagttaagttgatagatgaatataccgaagggttg
ttgacttgggatgtgttctcgtccatggtgaaggcgtttcactctactcgaatgggaagc
ccgaagagacggttagtgattcccaataaaccgaaggaagaagactacttctacgccaac
ccgcaagaatgtctgcagctgttagatgaaccattgagagtcatttga
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