Brassica rapa (field mustard): 103856190
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Entry
103856190 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103856190
Membrane trafficking [BR:
brp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
103856190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
Ig_TRAPPC9-Trs120_4th
Motif
Other DBs
NCBI-GeneID:
103856190
NCBI-ProteinID:
XP_033143156
LinkDB
All DBs
Position
A03:complement(3160787..3168471)
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AA seq
1272 aa
AA seq
DB search
MVEPVNSSLGKMLLEEISPVVMVLCTPLVEETFLKNGISFVETLKPFCNFSNIDVPVRTS
GDQLYRLKKFTLRLFNASDIKQPNVEVAKQRLEHVITEAGEKVFDDLKSDPPQITDILSN
PESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVVSSKDEQPVNKFVDLFNTNRLP
SLLNDGVMDPKILKHYLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGNVE
HQANPWASFKSSVSADKLGCALTGDDIVEIKDLMQEFASRHIIPYMEQKVRDLNQQISAT
RKGLRNQIKNLWWRKGKDDVPDSTKGSMYTFSSTESQIRILGDYAFMLHDYELALSSYRL
ISTDYKLDKAWKHYAGVQEMMGLAYFISDQSKKEAEYCMENAFSTYLKLGRSGFQNATRC
GLWWAEMLKAGDQYKEAASAYFRICGEEPLHAAVMLEQASYCFVLTKPAMLNKYGFHLVL
SGDHYKNSDQVSHAIRTYRSAISVYESTTWSHIKDHVHFHIGRWYALVGMHDVAVRNMLK
VLDCGNQSKATQEIFLRDFFEIVKKTGMKHEVVGLQLPFINMSSLQVIYEDHRTYASQAS
VLVQESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVAGESVKVDLEFRNPL
LISTSITSVSLICELTSNSDDLKVDKHPSSISLGTESSAEHNQGTTSGFSSFTLSEVDLT
LGGGEKKLVRLTVTPSEEGILKIVGVRWRLSGSVVGVHYFQSAPGKAKTNKGRRKNKLTP
TDALKFLVIKSLPRLLGSIDHLPEKLYAGDLRYLVLELKNKSEFPIKNLKMKISHPRFVN
PGNHEEEVTTEFPDCLKKGHEQNFVKSETSSVFSFPKDVSLQGDKSLRWPLWLRAAIPGT
ISLYFTIYYEMENVSSIMKYRTLRMHYNLKVLPSLETSFEITPSPSKLQECLVRMDILNR
ANSDSFQIHQLSTVGCRWGISLLERVDTILPSKSLLPGQALSCHFMIKDNRRSATEEEKT
MSIPPSQTDVKLFAQDDDEKLFDIVNSPLASFHESERSCQETSDQLSTNTVDFILISHPA
KSSNSSGVADIPKILSHHSCHNRIRSSNPLSWSLDGPQAIYHDFSTSLCEIQLKLVIRNT
SDGISSVSFNTIDSVQDVATPTPSAGNQSGWRYVPDVTEEMKLTSDVMGSRLGKPPSSME
SSPPFIWSGLSSTKVEIQPLSTTEVPLQISVFSPGIYNLSSYELTWERSGREDASSGTCQ
GYPYYLTVLQSQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcatcgcttgggaaaatgctcttggaagagatcagtccagtt
gtcatggttctctgcacgcctctcgtcgaagagactttcctcaagaacgggatatccttt
gtggaaacgctcaagccattctgcaacttcagtaatatcgatgttcctgttaggacatca
ggcgatcagctttatcggctgaagaagtttacgctcagattgtttaatgcctcagatatc
aaacaaccaaacgtggaggttgcaaagcaacggctagaacatgttatcactgaagctggg
gagaaggtttttgacgatttgaaatctgatcctcctcaaattactgatatactctctaat
ccagagtctgaaattgcacccacatggtttcagtattacaataaggaacttatccgtaca
ctgtccttttcagaccatgaggcttttgatcatcctgtggcttgtctcttagttgtttca
tcaaaagacgaacaacctgtaaacaaatttgtagatcttttcaacaccaatagattacct
tctttgcttaatgatggtgtaatggacccaaagattttgaagcattacctgttggtgcat
gacaatcaggatgccacaacagagagaacgtctaaagttctgtctgagatgagaagtaca
tttgggaacaatgagtgcaacttactttgcactaattcatctaaagaggggaacgtggaa
catcaggctaatccctgggcttcatttaaatcaagtgtttcggccgacaaacttggatgt
gctctcactggcgacgatatcgtggagatcaaagatctgatgcaagagtttgcatcgagg
catataattccttacatggaacagaaagttcgagatcttaatcaacagatttctgcaaca
aggaaaggacttagaaaccaaataaaaaacttatggtggagaaaaggaaaagacgatgtt
ccggattcaaccaaaggttctatgtatacatttagctccactgaatctcaaattagaatt
ttgggtgactacgccttcatgttgcatgattatgaacttgcattgtcaagctatcgctta
atatcaaccgattacaagctcgataaagcttggaagcactatgctggtgttcaggaaatg
atgggacttgcatatttcatctcagaccagtcaaaaaaggaagctgagtactgcatggaa
aatgcattcagcacttatctgaagcttgggaggtctggctttcaaaatgctacgagatgt
gggctctggtgggcagagatgctaaaagctggagaccagtacaaagaagctgcttctgct
tacttccgcatatgtggagaggaaccattacacgccgcagtcatgttagagcaagcttct
tactgcttcgtgttaactaagcctgcgatgttaaacaagtatggatttcatctagttctc
tcaggagaccactataaaaactctgatcaggttagccatgcaattcgtacatatagaagt
gcaatctctgtttatgaatcaactacatggagccatatcaaagaccatgtacattttcat
attggacggtggtacgcacttgttgggatgcatgatgttgcagttagaaatatgctcaaa
gtactggactgtggcaaccaatccaaggcaacccaagagatttttctcagagactttttc
gagattgttaagaaaactggaatgaagcacgaggtggtgggacttcaactaccatttatt
aatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagcttct
gttcttgtacaagagagcatctggcagtcactggaggatgatatcattccatcattaaat
tctggcaagtcaaactggctggaattacagtcaaagctactaccaaagaaatacaaggaa
tccaatgtttgtgtggctggagagtcagtgaaagtggatctggagtttaggaatcccttg
ctaatctctacttctataacaagcgtatctctcatctgtgaacttacctcaaattctgat
gacctaaaagttgataaacacccaagtagcataagcttggggaccgagagttccgcagaa
cataatcagggtacaacatctggtttttcttctttcactttgtctgaagtggacttaaca
ttaggcggaggcgagaaaaaactggtgagactcacggttacccccagtgaagaaggtatc
ctcaaaattgtcggtgtaaggtggaggttgtctggttctgttgtaggtgtgcattacttc
caatctgcccctggaaaggcaaaaactaacaagggaagacggaaaaacaaacttactccc
actgatgccttgaaatttttggtcatcaagagtctacccaggcttttgggttcaattgat
catctgcctgagaaattgtatgctggagatctacgttatcttgttttagagttaaaaaac
aagtcggaattcccgataaagaatcttaaaatgaagattagccatccaagatttgtaaat
cctggaaatcatgaagaagaggtgacaacggagtttccagattgcttaaagaagggccat
gaacaaaattttgtgaagagtgaaacaagtagtgtattttcatttccaaaggatgtgtca
ctgcaaggagataaatctttgaggtggcctctctggcttcgagctgccatcccaggaacg
atatctttgtatttcacaatatactatgagatggaaaatgtatcaagcatcatgaagtat
cgcaccctaaggatgcattataatttaaaggttttgccatctctagagacctcgttcgaa
atcactccctctccatcaaagttgcaagaatgtcttgtgcgtatggatatactgaaccgt
gcgaattcagattctttccaaattcatcagttgtcaacagttgggtgtcggtggggtatc
tccttacttgagcgtgttgatacaatcttaccttccaagtctctgcttcccgggcaagct
ttatcatgtcacttcatgattaaggataacagaagatcagcgactgaagaagagaaaacc
atgtccattcctcccagccaaaccgacgtaaaactgtttgctcaggatgacgacgaaaaa
ctttttgatatcgttaactcacctttagcaagcttccatgaaagtgaaaggtcatgtcaa
gaaacctcagatcagttaagtaccaataccgttgacttcattctaatctctcacccagca
aaatccagcaattcatcaggagtggcagatataccaaagattctgtctcaccattcatgt
cacaatagaatcaggagctcaaacccgctatcgtggtccctagacggtccccaagccata
taccacgacttctcgacctccttgtgtgaaattcaactaaaattagtaatcagaaacaca
tctgatggaatatcatctgtgagcttcaacaccattgattccgtacaagacgtagcaaca
ccaactccttccgctggaaaccaatccgggtggcgctacgtgccagatgtaacagaggaa
atgaaactgacttcagatgtcatggggagccgtctagggaaacctccatcttccatggaa
agctcacctcctttcatatggtcaggtttaagttccacaaaggtcgaaatccagccattg
tcaacaacggaggtcccgctgcagatatcggttttctctccaggtatctacaatctctct
tcgtatgaacttacctgggagcgctccgggcgtgaagatgcatcatcagggacatgccaa
ggctatccttattaccttactgttcttcagtctcagtga
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