Brassica rapa (field mustard): 103856545
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Entry
103856545 CDS
T03449
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103856545
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103856545
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_14
AAA_28
AAA_16
Zeta_toxin
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
103856545
NCBI-ProteinID:
XP_018513393
UniProt:
A0A3P5ZLW0
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Position
A03:4608793..4611828
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AA seq
594 aa
AA seq
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MVSDASKKKALQKKAAAAAKRGGKAAAAKAAASSSNGADSLSSGVDALQISDRTCTGILC
SHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGLRELPI
PDHMDIYHLSHEIEATDMTSLEAVMSCDEERLKLEKEIETLVEQDDGGGERLDTIYERLE
AMDASTAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTN
HLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTR
SELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNLDFGVDLDSRVALVGPNGAGKST
LLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLEVPALIYMMNEFPGNEEEKMRAA
IGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEAL
NEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKKHLKAKAGLED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgctagcaagaagaaggctctccagaagaaagccgccgccgccgccaaa
agaggcggtaaagcagccgccgctaaagccgccgcctcttcttcaaacggagctgatagc
ttgtcgagcggcgtcgacgctcttcagatatccgaccggacctgtaccggaatcctctgc
tctcatcctcagtccagagacattcgtattgaatctctgtctgttacgtttcatggttac
gacctgattgttgattcgatgctggagcttaactacgggagacgttacggtcttctcggg
ctgaatggttgtggaaagtctactcttttaaccgctattggactcagagagcttccgatt
cctgatcacatggacatctaccatctctcccacgagattgaagccaccgacatgacatct
ctcgaggctgtgatgagctgtgacgaggagaggttgaagctggagaaggagatcgagact
cttgttgagcaggatgatggaggcggagagcgtcttgacacaatctacgagcggttagaa
gccatggatgcttcgacggcggagaagcgtgctgctgagattctgtttggtcttggtttc
gacaaggagatgcaggctaagaagactaaggacttttctggtgggtggaggatgagaatt
gcgttggcgagagctctcttcattatgccaactatccttttgcttgatgagcccactaat
catttagatttggaagcttgtgtctggttagaggagagcctgaagaacttcgaccgtatc
ctcgtcgtggtctcccactcgcaggatttcttgaacggagtgtgtaccaacatcatccac
atgcaaagcaagcagctcaagtactacaccggtaacttcgaccagtactgccagacacgt
tccgagctagaggagaatcagatgaaacagtacagatgggagcaggagcagatctcccac
atgaaggagtacatcgccaggttcggtcacggttcagccaaactagctcgtcaagcgcag
agtaaggagaagactttggccaagatggagagaggtggactcacggagaaggtggcgaga
gacagtgtcctcgttttccgttttgctgatgttgggaagcttccacctccagtgcttcag
tttgtggaagtctcgtttgggtacactccggactaccttatatacaagaacctcgacttt
ggtgttgacttggactctagggtggcacttgtgggacccaacggagctgggaagagtact
ctcttgaagctcatgactggtgagctgcatccaactgaaggaatggtgaggcgtcacaac
cacttgaagattgctcagtaccatcagcatctagctgagaagctggaccttgaagtgcct
gcgcttatctacatgatgaacgagtttccgggtaacgaagaggagaagatgagagctgct
attggtaggttcggtctgaccggtaaggcgcaagtgatgccgatgaagaatctatctgat
ggacagaggagccgtgtgatattcgcgtggctggcttataagcagcctaacatgctttta
ctggatgagcctactaaccatctggatattgagacgatcgactctcttgccgaggcgttg
aacgagtgggatggtggtttggttcttgtgagtcacgacttcaggttgattaaccaagtg
gctcatgagatatgggtgtgtgagaagcagtgcatcacgaaatggaatggtgatattatg
gacttcaagaagcatctcaaggctaaagctgggcttgaagactga
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