Brassica rapa (field mustard): 103856709
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Entry
103856709 CDS
T03449
Name
(RefSeq) YTH domain-containing protein ECT1
KO
K20102
YTH domain-containing family protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103856709
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103856709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
FAM167
Motif
Other DBs
NCBI-GeneID:
103856709
NCBI-ProteinID:
XP_009132075
UniProt:
M4CRD9
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All DBs
Position
A03:complement(5165053..5168330)
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AA seq
509 aa
AA seq
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MDHPASSKKNQHNGTVSSGVKGFVEQQISPGDERIVSSSSSTPVTHPLDPSLYYQNPTNL
YPYGWNVAHSGYAQGINAWDGYPLYATSPEGLHVPQAVYNEDSSLMYQPGFAYNPYPSMM
LEGQIPFSPAYYPQFGMHFSHSEFGVGNDPTSAYMIPFGGYGGGNLSGNQGANSLTYPQA
MGILGPYDHDASQLPLHGNGISSSSSLGGYYPVGSYQSPSSTASYYGADNPVRLASDIGK
RREKEYSSVPTTSDLYGNRGPRSFTRVKSKNGSGLSSSAGDATNDSSTAGPNPSLYNHSE
FETDYKNARFFIVKSFSEDNVHRSIKYNVWASTPHGNKKLDTAYRDAEKMGGKCPIFLFF
SVNASGQFCGVAEMVGPVDFEKDAAYWQQGKWNGQFPVKWHIVKDVPNNRFSHILLQNND
SKPVTHSRDSQEVKLRQGIEMLRIFKDYEAHTSILDDFSYYDERESQKVGEDGVTKEETF
AVEQLSERLQAVTVEDGKEGEKEDLKEKT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcccgcttcttccaagaaaaaccagcacaacggaaccgtctcttccggcgtc
aagggcttcgttgagcagcagatatctcctggagatgaaaggattgtctcttcttcttct
tctactcccgttactcatcctcttgatccctccctgtattatcaaaaccctaccaatctc
tatccttacggttggaatgttgcacattctggttatgctcaaggcatcaatgcttgggat
ggttatccactttatgccacttcccctgaaggccttcatgtcccacaggctgtctacaat
gaagattcgtctcttatgtaccaacctggttttgcttacaacccttacccgtctatgatg
ttggagggccaaatcccattctctccagcttattacccacagtttgggatgcattttagc
cactcagaatttggtgttggaaacgacccaacatctgcttatatgataccttttggtgga
tatgggggaggcaacttatctgggaatcaaggggccaactctttaacatatcctcaagcg
atgggtatacttgggccatacgaccatgatgcttcacagttaccgttacatgggaacgga
atttcttcaagctcttctttgggaggatattatcctgtaggatcttaccagagtccaagc
tctactgcctcatactatggagctgataatccagtcagattagcctctgacattggtaaa
aggcgtgaaaaggagtacagctctgtacctaccaccagtgatctctatggtaatcgaggg
ccaagatcgttcaccagggtaaagagcaagaacggttctggacttagctcttctgctggt
gatgcaacaaatgattcaagcacagctggaccaaatcccagtttatacaaccattccgaa
tttgagacagattataagaatgctagattctttatcgtcaagtcgtttagtgaagacaat
gttcacagaagcattaagtataatgtctgggccagcactccacatggcaacaagaaattg
gatactgcttatagagatgctgagaagatgggtggaaaatgtccaatctttctcttcttt
tcggtaaatgctagtggacaattctgcggggtggcggaaatggttggacctgtagatttt
gaaaaggatgctgcttactggcagcaaggcaagtggaatggacagttcccagtgaaatgg
catatcgtgaaagatgtaccgaataaccggtttagtcacattcttttgcaaaacaatgac
agcaagcctgtgacacacagccgagactctcaggaggtgaagctacgtcaggggattgag
atgctgagaatattcaaagactacgaggcgcacacatcaatcctggatgatttcagctac
tatgatgaaagagagagtcaaaaggtgggagaagatggagtgacgaaagaagaaaccttt
gctgtggaacagttatcagagcgtcttcaagctgtcacagtagaagatggaaaggagggg
gagaaagaagacttgaaagagaagacctga
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