Brassica rapa (field mustard): 103856909
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Entry
103856909 CDS
T03449
Name
(RefSeq) heat stress transcription factor A-4a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103856909
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103856909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
CCDC39
APG6_N
Nup88
FlgN
Suppressor_APC
DUF5930
SSNA1
phiKZ_IP
CCPG1_N
DUF3450
BLOC1_2
UPF0242
AAA_23
SCD2_helical_N
AAA_8
CC_Bre1
FGR15_N
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
103856909
NCBI-ProteinID:
XP_009132283
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All DBs
Position
A1
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AA seq
388 aa
AA seq
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MDESNHGGSSSSLPPFLTKTYEMVDDSSSDSIVSWSQSNRSFIVWNPPEFSRDLLPRFFK
HNNFSSFIRQLNTYGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSLPNLQAQQ
NALTDSERQRMSSQIERLTKEKEGLLQKLHRQEQERDVFEQQVKKLKDQLQHMEKRQKTM
DSYVSQVMETPELALNLSPCLPETNERKRRLPRMLEDNQACVVVREEGSTSASDETEHQV
EELESSIAVWENLVSVSDDSCEGMAQSTGSMMILDVDDSSTCPESPPLSCIHLSIDTCPK
SPPSHKIIDINSDVSKEQNIVAPAPPPPATGVNDVFWQQLLTENPGSAEQREVQPEKKED
KGEDPSEKCWWNSRNVNAITEQLGHLTS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtaatcatggaggttcatcaagctcactcccacctttcctcacaaaaaca
tacgagatggttgacgattcctcctctgattcaatcgtgtcgtggagtcagagcaacaga
agcttcatcgtttggaacccaccagagttttcaagagaccttcttcccagattcttcaag
cacaacaacttctctagcttcatccgtcagcttaacacatacggttttagaaaagctgat
cctgagcagtgggagtttgctaacgatgatttcgtgagaggtcagcctcatcttatgaag
aacattcatagacgcaaacccgttcacagccactctctacctaacctccaagctcagcag
aacgcgttgaccgattcagagaggcagagaatgagtagtcagatcgagagactcaccaag
gagaaagaagggttgcttcagaagttacatagacaagagcaagaacgagatgtgtttgag
caacaagttaagaagctaaaagatcagttgcaacacatggagaagcgtcagaaaacaatg
gattcttatgtctctcaggttatggaaacaccagagcttgctctgaacctctcgccgtgt
ctgcccgaaacaaacgagaggaagaggcggctccctaggatgttggaggataaccaggca
tgtgttgttgtgagagaggaaggctctacaagcgcttcagatgaaacagaacatcaggtg
gaagagttggagtcgtcaatagcggtttgggagaatcttgtatctgtatctgatgattct
tgtgagggcatggcacaatcaacaggaagtatgatgatacttgatgtggatgattcatct
acttgtcctgagagccctcctctttcttgcatacacctaagtatcgacacgtgtcctaaa
tctcctccttctcataagatcatcgacatcaactctgatgtttcaaaggaacagaacatt
gttgctcctgctcctcctccaccagcaacaggagtgaatgatgtcttctggcagcagctt
ttgacagagaatcctggatcagccgagcaacgggaagttcaaccagagaagaaagaagat
aaaggtgaagatccaagtgagaaatgttggtggaattcgaggaatgtaaatgcaattaca
gaacagcttggacatctgacttcttga
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