Brassica rapa (field mustard): 103856934
Help
Entry
103856934 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103856934
04121 Ubiquitin system [BR:
brp04121
]
103856934
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103856934
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103856934
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103856934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
Zf_IFT144_1st
zf-C3HC4_3
zf-HC5HC2H
HypA
zf-HC5HC2H_2
zf-RING_6
zf-RING_5
FAR1_N
Motif
Other DBs
NCBI-GeneID:
103856934
NCBI-ProteinID:
XP_009132309
LinkDB
All DBs
Position
A3
Genome browser
AA seq
378 aa
AA seq
DB search
MEETMAARYWCHMCSQMVNPTIESEIKCPFCQSGFVEEMNGNGNGNGGLRDVQDPETEFG
TTDRAMTLWAPILLGMMSSPRRRRRFRRAEFVEEEEDNEDESNNVDHHHHRARRHGGEID
LDREFESLLRRRRRSSGNILQLLQGIRAGIASEYESSDNNERVIMINPYNQSLVVRDQTQ
THSALTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKVTEPLLQCSVC
LDEFERGVEAKEMPCKHKFHVKCIVPWLEIHSSCPVCRFELPSGNDDGDDESKVVSERGT
RTVPESSNREEVVEDVGSVERGREEDVRSGNGRRFSIPWPFSGFFSSSSSSSSSSPSSSG
SAQSGENNVYSRSYGSSR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcggctaggtactggtgtcacatgtgttcacagatggtgaaccca
acaatcgaatccgagatcaaatgccccttttgccaaagcggtttcgttgaagaaatgaac
ggtaacggtaacggtaacggaggcttaagagacgttcaagaccctgaaacagagtttgga
acaacagaccgtgcgatgactctatgggcaccaatcttgcttggtatgatgagcagtcct
cgtagacggagaaggttcagaagagcagagtttgttgaagaagaagaagacaacgaagac
gaatccaacaatgttgatcatcatcatcatagagctaggcgtcacggtggagagattgat
ttggacagagagtttgaatctctgttaaggagaagacgaagaagctcagggaatatactg
cagctccttcaagggatacgtgcagggattgcttcagagtacgaaagctctgataataac
gagagagtgatcatgatcaatccttataaccagtccctcgttgttagagatcaaacgcag
actcattctgcgttgacttcgcttggagactacttcatcggacctggtttggatcttttg
cttcagcatttggctgagaatgatcccaacaggcaagggactccgcctgctcgtaaagaa
gccgttgaagctttgccgacggttaaagtgacggagccgttgttgcagtgttcggtttgt
ttggatgagtttgagagaggcgtggaggctaaggagatgccgtgtaagcataagtttcat
gtgaaatgtattgttccgtggcttgagattcatagctcgtgtcctgtttgtcggtttgag
cttccttctgggaatgatgatggtgatgatgagagtaaggttgtgtctgagagaggaacg
agaactgttcctgagagtagtaacagagaggaggttgttgaggatgtggggagtgtggag
agaggaagagaggaggatgtgaggagtgggaatgggaggaggttttcgattccatggccg
ttcagtggtttcttctcttcttcttcttcttcttcttcgtcttctccttcatcatctgga
tcagctcagtctggtgagaacaatgtctactcaagatcttatggttcttctcgctga
DBGET
integrated database retrieval system
