Brassica rapa (field mustard): 103856941
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Entry
103856941 CDS
T03449
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103856941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103856941
Membrane trafficking [BR:
brp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103856941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
TPR_9
TPR_12
RMD1-3
PPTA
CFAP70_mid_TPR
TPR_20
PEX18_PEX21_C
CABIN1_N
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
103856941
NCBI-ProteinID:
XP_009132316
UniProt:
M4EJH2
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Position
A3
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AA seq
730 aa
AA seq
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MAMRDLVNGGAACAVPGSSSSSNPLGALTNALLGSSSKTQERLKEIPNATSSGPGPQFYS
QDQHLSSLPGSELDQPLLQPGAQGTEFFRGFRSVDQNGLGAAWDEVQRGGPMPPMGPMYE
PVQPTFEGPPQRVLSNFLHSFVESSRGGIPFRPAPVPVLGLSQSDKQCIRDRSSIMARHF
FADRGEEFINSQVNALLSSLDIDDGIQARGHMPGRFRELDDYWNESQAVTKPGLHPADSW
ATEFDQHQHGMNHGGPDAWVNSFEQQHGVNGWATEFEQGQSQLMSNQMRSMNMQNLAAME
QTRKLAHTLSQDVNPKFQNSRFLQFVSKMSRGELIMDENEVKPGPAPGDWATEYEQQYLG
PPSWADQFANEKLARGPEQWADEFASANRQQESAEDQWVNEFSKLNVDDWVDEFAEGPAG
GSSADAWANAYDEFLTEKNAEKQNSGVYVFSDMNPYVGHPEPMKEGQELFRKGLLSEAAL
ALEAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPSNLEVLLALGVSHTNE
LEQATALKYLYGWLRNHPKYGSIAPPELADSLYHADIARLFTEASQMNPEDADVHIVLGV
LFNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDLKPNYV
RAWANMGISYANQGMYKESIPYYVRALAMNPKADNAWQYLRLSLSCASRHDLIEACEARN
LDLLQKEFPL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagaccttgtcaacggcggagcggcctgcgcagttcccggctcttcttct
tcttccaaccccctcggagctctcaccaacgcgctacttggttcctcttccaaaactcag
gaaaggctcaaggagatacctaatgccaccagttcaggtcccgggcctcagttttactct
caggaccaacacttaagctcgcttcctggttctgagttagatcagcctcttctccaacct
ggtgctcaggggacagagttcttccgtggctttcgatctgtggatcagaatggtcttggt
gcagcttgggatgaagtgcagcgtggtggacctatgcctcctatgggacctatgtatgag
cctgtccagcccacatttgaaggaccccctcaaagagttttgtcaaactttctgcattca
tttgttgagagtagccgtggtggcattccttttcgtccagcacctgtccctgtgctggga
ttgtcacaaagtgacaaacaatgcatacgtgatcgtagtagcataatggcccggcatttt
tttgccgacaggggagaagaatttatcaattctcaggtaaatgcattactgtcgtcgtta
gatatcgatgatggcattcaagctagaggtcatatgcctgggagatttcgggagctagat
gattactggaatgagtctcaggctgttacgaagcctggtttacatcctgcggatagttgg
gcgactgaatttgaccagcatcagcatgggatgaatcatgggggtcctgacgcatgggtc
aactcttttgagcaacagcatggtgtgaatgggtgggccaccgagttcgagcagggtcaa
tctcaactgatgtcaaaccaaatgagaagtatgaatatgcaaaatttagctgcaatggag
cagactcgtaagcttgcccatacactgtctcaggatgtcaatccgaaatttcagaattca
agattccttcagtttgtttctaagatgagccgcggtgaactcattatggatgagaatgag
gtcaagcctggacctgcccctggggactgggctactgaatatgaacagcagtatctgggg
ccgccaagttgggctgatcaatttgccaatgagaaacttgcacgtggaccagaacagtgg
gctgatgagtttgcttccgctaaccgacagcaagaatcggctgaggaccaatgggttaat
gagttttcaaagttgaatgttgatgactgggtagatgaatttgctgaagggcccgcgggt
gggagttcggctgatgcatgggcaaatgcttatgatgagtttctgacggaaaaaaatgct
gaaaaacaaaatagtggtgtatacgtcttctctgacatgaatccttatgtgggtcacccg
gaacctatgaaagaagggcaggaattgtttcgcaaaggacttctgagtgaagcagcgctt
gctctagaagctgaggttatgaaaaatcctgagaatgctgaaggttggagattacttggg
gtcacacacgcagagaacgatgatgatcaacaggcaatagctgcaatgatgcgggcacag
gaggccgatccgtcaaatctagaggtgcttcttgcacttggtgtgagccataccaacgag
ttggagcaagcaactgctttgaagtacttatatggatggctgcggaatcaccccaagtat
ggatcaatcgcacctccagagcttgcagattccctgtaccatgctgatattgccagatta
ttcactgaagcttctcagatgaatcctgaggacgccgatgtgcatatagtgctaggtgtt
ctcttcaatttgtcaagggaattcgatagagcaattacttccttccaaacagctttacag
ttgaaaccaaacgattattctctttggaataagcttggcgcaactcaagccaacagtgtc
cagagtgctgatgccatatctgcttatcaacaggctctggatttaaaacctaattacgtt
cgtgcctgggcaaacatggggatcagttacgcaaaccaggggatgtacaaagaatcaatc
ccttattatgttcgtgcccttgcgatgaatcctaaggcagataacgcttggcaatacttg
aggctctcgttaagctgtgcgtcaagacatgacctaatcgaagcttgtgaggcaaggaat
ctcgatctcttgcagaaagagttcccactttga
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