Brassica rapa (field mustard): 103857097
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Entry
103857097 CDS
T03449
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103857097
Spliceosome [BR:
brp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103857097
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
103857097
NCBI-ProteinID:
XP_009132497
UniProt:
M4EJX4
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All DBs
Position
A03:6524941..6528118
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AA seq
422 aa
AA seq
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MSSVSSQQQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANKNQAFI
EFEDLNQAIQMISFYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVVGNVLLVTVEGE
DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDAETATSARTSLDGRSIPSYL
LPEEVSQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVIVGVDGRKME
PESNVLLASIENMQYAVTLDVLHTVFVAFGAVQKIAMFDKNGGVQALIQYPDVQTAVVAK
GALEGHCIYEGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPDAAVAMAPQPSHNPYPGNS
QQYHAAGASHYQQQHQQPQGGWGQQSGGQGHDPYMAAPSMHQGPGGHMPPHHYGGGPSGP
MH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtatcaagccagcaacagttccgctacacgcagactccttcgaaggttctt
cacctgaggaacttgccgtgggaatgcactgaggaagagctgatcgagctcgggaagccc
tttggcaccgttgtgaatacgaagtgcaacgttggagctaataagaaccaagctttcatt
gagtttgaggatttgaaccaagcgatacagatgatttcgttctacgcgtcttcgtcggag
cctgctcaggttcgaggtaaaactgtctacctacagtactccaacaggcaggagattgtg
aacaacaaaacggcggcggatgttgtggggaatgtgcttcttgtgacagtggaaggggag
gatgctcgtatggtcagcattgatgtcttgcatctggtattctcagcctttgggtttgtc
cacaagattactactttcgagaagacagctggatatcaggcacttgttcaattttctgac
gcagaaactgcaacctctgcaagaacttccctcgatggcagaagcatccctagttatcta
ctccctgaggaagtcagccaatgctctcttaaaatcacgtactcagctcatacagatttg
actgtcaaattccagagccatcggagcagggactatactaatccttaccttcctgttgct
ccatcagccattgatagtactggtcaggtgattgtgggtgtagacgggaggaagatggag
cctgaaagtaatgttcttcttgcatccatcgagaacatgcagtatgcagtaaccttggat
gttttacacacggtttttgtagcatttggagctgttcaaaagattgcaatgtttgacaag
aatggtggggtacaggcattgattcaatacccagatgtgcaaacggctgtggtggcgaag
ggagcattggaaggacactgtatttatgagggtgggttttgtaagctacacatcacttac
tcacgccacaccgacctgagcataaaggtgaacaatgatagaagcagagactacacaatg
cctgacgcggctgttgcgatggctccacagcccagccataatccatacccgggtaattca
cagcaataccatgcagcaggtgcgagccattaccagcagcagcatcagcagccacaaggg
ggatgggggcagcaatcaggagggcaaggccacgatccctacatggcagcaccgtcgatg
catcaaggcccgggtggtcatatgccgccacaccactatggtggtggtccttctggtcca
atgcattag
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