Brassica rapa (field mustard): 103857258
Help
Entry
103857258 CDS
T03449
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103857258
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP100
103857258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
nSTAND3
AAA_22
UVR
TniB
AAA_14
AAA_28
NACHT
Mg_chelatase
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
AAA_23
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
103857258
NCBI-ProteinID:
XP_009132682
UniProt:
M4E1V1
LinkDB
All DBs
Position
A03:7192676..7197046
Genome browser
AA seq
929 aa
AA seq
DB search
MAMATRVMSQYTPLSLACSQRNAPSRGSGTSKRSVKMMCTQLQVSGSRMQGFLGLRGNNV
LDTLGRSRQSFGGKVRQAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNF
VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV
LELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNE
VTANVGGGSGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL
IGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME
EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
DPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRF
LPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDRE
IELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLL
KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLQEVFERLKKK
EIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD
SEGKVTVLNGGSGTPTTSLEEQEDSLPVA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccacaagggtgatgtctcaatatactccactgtctttagcctgttcacag
aggaatgctccctctcgtggatctggcacctcaaaaagatcggtgaaaatgatgtgcact
cagctacaagtgtctggctcaagaatgcaaggctttctgggattgcgtgggaacaatgtc
ttagacactctagggagatcccgtcagagtttcggtggtaaggtgcggcaggcaatgaat
gtgcccaaggggaaaggtagccggggtgtggtcaaagccatgtttgagaggtttactgag
aaagctatcaaggttattatgcttgctcaggaggaagctaggaggctaggccacaatttt
gtgggaaccgaacagattcttctgggtcttattggtgagggtactggaattgctgctaag
gttttgaagtccatggggattaacctaaaggatgcacgtgtggaggttgagaagattatt
ggaaggggcagtgggtttgttgctgttgagatcccgtttactcctcgtgctaagcgtgtt
cttgaactctcactggaagaagctcgccaactcggtcacaattacatcggttccgagcac
cttcttcttgggttgcttcgtgaaggtgaaggtgttgctgcccgagtccttgagaattta
ggagcagatcctagtaatattcgcactcaggtgatacgcatggtgggtgagaacaatgag
gtcactgctaatgttggtggaggaagcggcagcaataagatgccaactcttgaagagtac
gggacaaacttgacaaaactggctgaggagggtaaattggacccagttgttggtaggcag
ccgcaaatagaacgtgtcgtgcagattcttggcaggaggaccaagaacaacccatgtctt
attggagaacctggtgttggtaagacagctattgccgaaggactagcgcagcgtattgcc
agtggagatgttcctgaaactattgaagggaagaaggttataacacttgacatgggtctt
ctggttgctggaacgaaatatcgtggagagtttgaagagagattgaaaaagcttatggag
gaaattaaacagagcgacgagatcatcttgtttatcgatgaagtgcacactttgattgga
gcaggagcagcagaaggtgcaattgacgcagctaacattttaaaacccgctctcgctaga
ggtgaattgcagtgcattggagcgacaacattagacgaatacaggaagcacattgagaaa
gaccctgcattggaaagaagattccagccagtgaaagtacctgagcctactgtggatgaa
acgattcagatcctaaagggtctgcgagagcgatatgaaattcatcataagcttcgttac
actgacgagtctttagtagcagctgcacagttgtcataccagtatatcagtgatcgtttc
ctacctgacaaggcaattgacttgatcgatgaagctggttctcgggttcgacttcgtcat
gcacaggtccctgaggaggctagggaacttgagaaggagcttaggcagataacaaaggag
aagaatgaagctgtccgtggccaggactttgagaaggctgggactctacgggatagagaa
attgaactcagagctgaggtatctgctatccaagcgaaaggcaaggaaatgagcaaagca
gagagtgagactggtgaggaaggtcctatggtgacagagtcagacatccagcacattgtg
tcttcatggactggtatccctgtagagaaggtatcaaccgatgagtctgatcgcctcctc
aagatggaagaaacccttcacaaacgtgtcataggccaagatgaagctgtcaaagccata
agccgagccattcgccgtgcacgtgttggactcaagaaccctaaccgtccaatagccagt
ttcatattctctggtcctaccggtgtcgggaaatcagagcttgccaaagctttggcagct
tactactttggatctgaagaagccatgattcgtctagatatgagtgagttcatggaaagg
cacacagtctcgaaactcataggttcgcctcctggatacgtcggttacactgaaggaggt
cagctaacggaagcagtcagacgccgcccttacacagtcgttctattcgacgagatagag
aaagcccacccagatgttttcaacatgatgcttcagatcctcgaagatggtagactaaca
gacagcaaaggaagaacagtggacttcaaaaacacgcttctcatcatgacatcaaacgtc
ggaagcagtgtgattgagaaaggaggaagacgtattggtttcgacttggactacgacgag
aaagacagcagctacaacagaatcaagagccttgtgaccgaggagctgaaacagtacttc
agaccggagttcctcaacaggcttgacgagatgattgtgttcagacagctaacgaagctg
gaagtgaaagaaatcgcagacattctgttgcaggaagtgttcgagaggctgaagaagaag
gagattgagcttcaggtgaccgagaggttcagagagagagtagtggacgaaggttataac
ccgagctatggagcgagaccgttgaggagagccatcatgagacttttggaggatagcatg
gcggagaagatgctagcgagagagatcaaggaaggagactcagtgattgtggacgttgac
tctgaaggcaaagtgacagtgctaaatggtggaagtggcactccaacaacatccttggag
gagcaggaagattctctccccgttgcttga
DBGET
integrated database retrieval system
