Brassica rapa (field mustard): 103857408 Help Entry 103857408         CDS       T03449                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism brp  Brassica rapa (field mustard) Pathway brp03440   Homologous recombination brp03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:brp00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     103857408    03450 Non-homologous end-joining     103857408  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:brp03032]     103857408    03400 DNA repair and recombination proteins [BR:brp03400]     103857408 DNA replication proteins [BR:brp03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     103857408 DNA repair and recombination proteins [BR:brp03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      103857408     BRCA1-C complex      103857408    NHEJ (non-homologous end-joining)     MRX complex      103857408 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SbcC_Walker_B SMC_N Rad50_zn_hook AAA_21 AAA_29 ABC_tran Motif Other DBs NCBI-GeneID:  103857408 NCBI-ProteinID:  XP_009132827 LinkDB All DBs Position A03:7896673..7905581 Genome browser AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGSNGAGKTTIIECLKVSCTGELPPNAR SGHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQERTESSKA QMSELESSIQKVDAEVHNKEMMLKDLRKLQDQVSRKTAERSTLFKEQQRQYAALPEENED TMEELKEWKSKFEERIALLETKIRKMERELDDTATTISSLHNAKTNYMLEISKLQTEAEA HMLLKNERDASIQNIFSNHNLGNVPSTPFSTDVVLNLTHRIKSRLGEFEMDLLDKKKSNE TALSTAWDCYMDASDRWKSIEAQKRAKEDIKTGISKRIEEKEIERDSFEFEISNVDVKQI DERENLVQAELERKSKQNSESGFESKIEQKQHEIYSMEHKIKTLNRERDVMAGDAEDRVK LSLKKTELENLKKKHKKIIDESKDKIRGVLKGRLPLEKDMKKEIVQALRSVEREYDDLSL KSREAEKEVNMLQMKIQEVNNSLSKHHKDTESRKRYIESKLQALKQESFTIDAYPRLLDS AKDKRDYHKSKYNMATGLRQMFEPFEQVAREHHFCPCCERTFSAEEEDNFVKKQRAKAST TGDHVKALAAESSNADSIFQQLDKLRSVFEEYTKLTDEIIPLAEKSLQEFTEELEQKSEA LDDVLAISAQIKSEKESVEALVQPLENADRLFQEIVSNQKQIEDLEYKLDFRGHGVKTMQ EIQSELSSLQSTKDKLHDELEKLRDEQIYMERDISCLQARWHALREEKAKAANLLRDVTK TEEDLERLAEEKSQLDLDVKHLTEAVGPLAKEKEQLLSVYNDIKVKRNQEYEELAEKKRN YQQEVEALLKANSKINEYNDLKKGERLNDIQEKQRAAESQLQSSESRRNEIVAELSKSKD LMRNQDQLRRNIEDNLNYRTTKAAVEVLTREIESLEEQILNFGGIPAVEAEIVKILRERE RLLSELNRCRGTVSVYQSSISKNKVELKQTQYKDIDKRHFDQLIQLKTTEMANKDLDRYY NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQT GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRIAKDDMQHSIIETQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacggtcgataagatgctcatcaagggcatccgaagcttcgaccctgaaaataag aacgtcatcactttcttcaggcctttaaccctaatcgtcggctccaacggcgccggaaaa actacgattatagagtgcttgaaggtttcttgtacgggagagttgcctcctaacgcgagg tctggccacagcttcatccatgaccctaaggttgctggggaaacggagactaaagcacaa attaagctgcggtttaagacagctgcagggaaggatgtggtatgtataaggtcgtttcag ttgacgcagaaggcttcgaagatggagtacaaggctattgagagtgtgcttcaaaccatt aatcctcacactggagagaaagtatgtctcagctacaggtgcgctgatatggatagggag ataccagctttgatgggcgtgtcaaaagctattttagaaaacgtcatatttgtgcatcaa gatgagtctaattggccactgcaagatccttctactctgaaaaagaagtttgatgatatt ttctcagccaccagatacacgaaggcgttggaggttataaagaaacttcacaaagatcaa gctcaggagataaaaacgtataagttgaagttggaaaatctgcagacgttgaaagatgca gcttataagcttcgtgagagcattgctcaagatcaagaaagaacagagtcttcaaaagct cagatgtcggaactggaaagcagcattcagaaagtggatgctgaagttcataataaggaa atgatgttaaaagatctgagaaagctacaagaccaagtttcaagaaaaactgccgagaga agcaccttatttaaggaacagcagagacagtatgcagcattacccgaggaaaatgaagat actatggaagaactaaaagaatggaaaagcaagtttgaagaaagaattgctcttttggag accaaaattcgaaagatggagagagagctggatgacacagcaactacaatttcttctctt cacaatgcaaaaaccaactatatgctggagatcagcaagctacaaacagaagctgaagct catatgctgctgaagaatgaaagagatgcttcgatccagaatattttttccaatcacaat ttgggaaatgttccgagtacccctttcagtactgatgtagttttgaatctcacacatcga ataaaatcaagactgggtgaatttgagatggacttgctggataagaagaaatcaaatgag actgctctaagtacggcttgggattgctatatggatgctagtgaccgttggaaaagcatc gaagctcagaaacgagctaaagaagatatcaagacaggcatatcaaaacgcatagaagag aaagaaattgaacgcgattcatttgaattcgagatatccaatgtggatgttaaacaaatt gatgaacgagaaaacctagtgcaagctgagcttgagagaaagtccaaacaaaactctgaa agcggatttgaatccaaaatagaacagaaacagcatgaaatatacagcatggagcataaa atcaagactctcaatcgagaaagagacgttatggctggtgatgctgaggatagagtgaaa ttgtctttgaagaagacggagctggagaacctcaagaagaaacacaaaaagataatcgat gagtccaaggataaaattcgaggggtgctgaaggggagattgccacttgagaaggatatg aagaaggaaatagttcaagctctgaggtcagttgaaagggaatatgatgacctgagctta aaatcccgagaagcagaaaaggaggtgaacatgttgcagatgaagattcaagaagtgaac aatagcttatccaagcatcacaaggatacagaatcaagaaagagatacattgagtccaag cttcaagccttaaaacaggaatcatttaccattgatgcttatcccagattgttggattcg gcgaaggacaaacgggactaccacaaaagcaaatacaacatggcaactggtttgcgccag atgtttgagccatttgagcaggtagcccgtgaacatcatttttgtccttgctgcgagcgc actttttcagctgaagaagaggataacttcgttaaaaagcaaagggctaaggcttcaacc acgggggatcatgtcaaagcattagcagcagaatcttcaaacgctgactctatctttcag cagctggataaacttcgctcagtttttgaagagtatacgaaactaactgatgaaatcatt cctctcgctgagaaatctttgcaagaatttacagaagagctggagcagaagtctgaagcc cttgatgatgtattggcaatctcagcgcagataaaatctgagaaggaatcagttgaagca ctggttcagcccctggaaaatgctgataggcttttccaggaaattgtatccaaccagaag caaattgaagatctcgaatataaacttgatttcaggggtcatggtgttaaaactatgcaa gaaatccaatcagaattaagtagcctccaaagcaccaaggataaattgcacgatgaactg gagaaattaagggatgaacagatttacatggaacgggatatatcatgccttcaggccaga tggcatgcactaagagaggagaaggctaaggctgccaatttgttacgcgacgttacaaag acagaagaagacctagagcgtttagccgaggaaaaaagtcaacttgacctagacgttaag catttgaccgaagctgtgggccctttagccaaggaaaaggagcagttactgagtgtttac aatgatatcaaagttaaacgtaatcaagagtatgaggaactggctgagaaaaagagaaac taccaacaagaagttgaggcattgctcaaggccaattctaagattaatgagtataatgat ctgaagaaaggagagcggttaaatgatattcaagaaaagcagcgggcagctgaatcccag cttcagagctccgaatctagacggaatgaaattgtagctgaactgagcaaaagtaaagac ttgatgcggaatcaagatcaactgagaagaaatatagaggataacctgaactaccgaaca acaaaagcagcagtcgaggtgcttacgcgtgagattgaatcactggaagagcaaatcttg aattttggtgggataccagcagttgaagctgaaattgtaaagatattgcgggaaagagaa agacttctttcagagttgaatcggtgtcgtggaacagtgtctgtttatcagagcagtatt tcaaagaacaaagtggagctaaaacagacacaatacaaggacatagataagcggcacttt gatcaactgatccagctaaagacaactgaaatggcaaataaggacttggatagatactac aatgcccttgacaaagcactaatgcgatttcacacaatgaaaatggaggaaataaataag attataagggaactatggcagcagacatacagaggtcaagatatcgattacataagaata cactcagattcagagggtgcaggcactcgctcgtacagctacaaggttcttatgcagact ggtgatacagaacttgaaatgagaggaagatgcagtgctggtcaaaaggttcttgcttca ttgataataaggttggctttggccgagacattttgcctaaactgtggaatattagcactt gatgagccaactacaaacttggacggtccgaattcagaatctcttgcaggagctcttctt aggatcatggaagacagaaagggccaagagaatttccaactcatagtcattacccacgac gaacgctttgctcaaatgattggccaacggcaacatgctgaaaaatattaccggatcgcc aaagatgatatgcaacacagcataatcgagacccaagagatctttgattga

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