Brassica rapa (field mustard): 103857430
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Entry
103857430 CDS
T03449
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103857430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103857430
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103857430
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
N-HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
103857430
NCBI-ProteinID:
XP_009132856
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Position
A03:7989038..7998519
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AA seq
316 aa
AA seq
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MVNLPDSLYEDYTISRVNLPSALASTVPLSPDIRMIIKWVNDLHKNIPSTFDFALQNLTI
HRKNFEILPRLLWKSHFTVAMLLQEILKIYPLTSRPVYSQNWMHLRVYNILLLFQCITHY
PETRNCFLKADMQYYFYPLMDINVTDPRLECLRIGALGVIAHMLRPPVDPAAVCYLVNTS
CLQHCTKAIEIGSTESKTIAVFIINKILSTGEGLQYCCVLPDRFFFIDGLLKRLLMYLTT
MARPCPSLFNLLVGCYTSLSYKPRARRGLRRYLPDMLFNNTFASLLAADPAAERNRRELI
KNLEMKTQPEKNRFTK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatctaccagattccctttacgaagactacactatatccagggtgaatcttccc
tctgctttagcctccaccgtcccactttcaccggacataagaatgattattaagtgggtc
aatgatcttcataaaaatatcccatccaccttcgatttcgcgctgcagaatctcaccatt
cataggaaaaatttcgagatcttgcctcggcttttatggaaatctcattttacagtggcc
atgctgttgcaggagatcttgaaaatctacccactcacctcacgtccagtttactcacag
aactggatgcaccttcgagtgtacaacattttgcttttgttccagtgcataactcattac
ccggagacaagaaactgctttcttaaggctgatatgcaatactatttctatcctttgatg
gacattaatgtcaccgatccgcgtcttgaatgcctaaggattggtgcattgggtgtcatt
gctcatatgttgaggccgcctgtagacccagctgctgtttgttaccttgtgaacacaagt
tgtttacaacattgcacaaaagccatcgagattggctcaacagaatcaaaaacaattgct
gtattcataattaacaagattctgtccactggtgaggggcttcagtactgctgcgtcttg
cctgatcgttttttcttcatagacggtctcctgaaaaggctgcttatgtatcttaccacc
atggccagaccttgtcccagcttgttcaatcttcttgttggctgctacaccagtctctcc
tacaagcccagggctcgaaggggactaaggcgttaccttcctgacatgctgttcaacaac
acctttgctagtttacttgctgcggacccagcagctgagaggaatcgtcgggagctgatt
aagaatctggaaatgaaaactcagccagaaaagaacaggtttactaagtaa
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