Brassica rapa (field mustard): 103857529
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Entry
103857529 CDS
T03449
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103857529
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
Other 90S particles
103857529
Pre-60S particles
Other pre-60S particles
103857529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_N
Mo25
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
103857529
NCBI-ProteinID:
XP_009132983
UniProt:
M4E2H2
LinkDB
All DBs
Position
A03:8415995..8422687
Genome browser
AA seq
1278 aa
AA seq
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MEPLCLDVETNMYLTHSEPDLPVSQDFGEFMLSRLSQSKRPDHKHLSAVIEELSKTLAEG
NHSQTPVAYFAATCSSLDSLLSADSEPSLDVVQPHVVILSLVFPKVSAGVLKRNGLALRL
VLSVLRLRSASPECLVSALKCLVHLLTTVESMTANEVSESYSILLNFVTHSDGKVRKLAS
SCLRDVLVKSSGTKAWQSLSGTIAELFQKYLDLAHKSEARSAEGAQQVLYILSALKECLA
LMSKKHIATVIDGFKILLITRDSFIARPVIDSLNALCLNPASEVPVEALVEVLYHAAVLF
SAPETSADAMTSSARLLKVGMMRAFNLNRDICVAKLPGVFNGLKDIIASEHEEAIFAATD
ALKSLINSCIDESLIRESINGIRNSNLEARKSSPTVIEKLCVTVESLLDYKYHAVWDMAF
QVVSTMFDKLGEDASYFMRKTLEDLSDMKDLPDEDFPYTKQLHECVGSALGAMGPETFLN
IVRLNLEASDLSEVNVWLFPILKQYTVGGRLSFFTEYISRMIETMSQKAQQLKLQGLTSA
SRSVDSLVYSLWAMLPSFCNYPVDTAESFADLGRILCGALQSQAETRGIICASLNILIQQ
NKEVVEGKEMPVSDASPAMVRASARYNSDIATANLKVLRSCAPKLLDVLSRIFHESGKDD
GGSLQSAIGNLASIAEKKTVSKLLFKTLRELLEATKTAIAQDESSASGMDVDNTADKNSS
SNLRARLFDLLVSLLPGLDGQEVDTVFSSLKPAMQDPKGQIQKKAYKVLSVILKSSDGFV
SKHLEELLELMHNICHVSAKRHKLDCLYFLLAHASKTDDLKARKDIVSSFLPEVILALKE
VNKKTRSRAYDVLVQIGHAYADEENGGDNEKLHGYFNLVVGCLAGEKPQMISAAVKGVAR
LTYEFSDLIASAYNLLPSTFLLLQRRNKEITKANLGLLKVLVAKSPVEGLHANLKSMVEG
LLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVKSVMPEEHMKLLTNIRKVKERKEKKYAA
ASEMSRSQHSKETSSKVSRWNDTKIFSDFDDEDEDSDGDYMDGETHGRSKASSLLKSKPS
ALRSKKSQRQSHLEVNESDDEPLDLMDRYKTRSALRSSELRNKRKADSDEEAEFDEEGRL
IIQEGGRGKRKEISDPDSDAKSSKGSRFSANTSKKNQKRMKTSESGYAYTGKEYASKKAS
GDLKRKDKLEPYAYWPLDRKMMSRRPDQRAVAVRGMSSVVKLTKRLEGKSSAEALAATKF
QKFKRSGQKKSAGKKKSK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggagccattgtgccttgacgttgaaaccaacatgtacctcacacactcagaaccagac
ctgcctgtttcccaagactttggggagttcatgctctctcgcttatctcagtcaaaacga
ccagaccataaacatctatccgctgtcatcgaggagctatcaaagactctagcggaaggt
aaccacagtcaaacacctgtggcttacttcgccgccacgtgtagttccctagacagcctc
ttgtctgcagattctgagccatctctggatgtcgtccagccacacgttgtcatcctctcc
cttgtgttccctaaagtctcagccggagtactgaagaggaacggcttagctttgcgtctc
gtcctcagcgtcctgcgtctgagatcagcaagtcctgagtgcttggtttcggctttgaag
tgtttggttcatctcctcactaccgttgagtcaatgacagcgaacgaagtctctgagtcc
tacagcattttgctgaacttcgttactcattcagatggaaaggtaagaaagctagcgagc
tcctgtctccgtgatgtcctggtgaagtcctctggtaccaaggcatggcaatcgctcagt
ggaactatagcggaactgttccaaaaatatttagaccttgctcataaatcggaagcgcgt
tctgctgaaggagcacagcaagtgctctacatcctcagcgctttaaaagagtgtttggcc
ttgatgtcgaaaaagcatattgctaccgtgattgatgggtttaagatactgctgatcacg
cgtgattcgttcattgcaaggccggtgatagactctttgaatgcgctttgtctcaaccca
gcctctgaggttccggttgaggcgctggtggaagtgttgtatcatgctgctgttctgttc
tcggcgcctgaaacgtctgctgatgctatgacctcctcagcgcgtttactgaaagttggg
atgatgagggcttttaaccttaatagagatatttgcgtggctaaacttcctggtgtgttc
aatggtctgaaagatattatcgcatctgaacacgaggaggcaatctttgcagcaacagat
gcgttgaagagtttgataaactcgtgcatcgatgagagtttgatcagagaaagcatcaac
ggaatacggaattcaaacttggaggcaaggaagtctagtccaacagtcattgaaaaactg
tgtgtgacagttgaaagcttgcttgattacaagtaccatgcagtctgggacatggctttt
caagtagtttctaccatgttcgataaattaggtgaagatgcttcatactttatgaggaag
accctggaggacttatcagatatgaaagatttacctgatgaagactttccttatacgaag
cagttgcatgagtgtgtaggatcagcccttggtgctatgggacctgaaacgtttttaaac
attgtgcgtttaaaccttgaggcgagtgatctgtctgaggtcaacgtttggctcttccca
atcctgaagcagtatacagtgggagggcggctaagtttcttcacagagtatatttctaga
atgatcgaaacaatgagccagaaagctcaacagctcaagctacaaggtcttacttcagca
tctaggagtgtggactctctcgtatattcattatgggctatgttaccttcattttgcaac
tatcctgtggatacagcggagagttttgcggatctggggcgaatactgtgtggagctctt
caatcacaggctgaaactcgaggaattatatgcgccagtttgaatatcctaattcaacaa
aataaggaagttgtggagggtaaagaaatgcctgtcagtgatgctagtcctgctatggta
cgagctagtgctcgttataattcagacattgcgacagctaatttgaaagttctgcggtcg
tgtgctcctaagttattggatgttttatcaaggatatttcatgagtctggcaaagatgat
ggcggttctcttcagtctgcgatagggaacttggcgtccattgcggagaaaaagactgtt
tcaaagctacttttcaagacactgcgagagcttttagaggccactaaaactgctattgca
caagatgaaagctctgctagtgggatggacgtggataataccgcagacaaaaattcttct
tccaaccttagggcaaggttgtttgatctgctagtttctcttttacctggtttggatggt
caagaagtagatactgtattcagttctctgaagcctgcaatgcaggatcccaagggccaa
attcaaaagaaagcgtacaaagttctttcagttatcttgaagagttctgatggatttgtt
tcaaaacacctcgaggagttgcttgagctgatgcacaatatatgccacgtctctgccaag
cgccataaacttgattgtttgtacttcctgttggctcatgcatcaaagactgatgatttg
aaggcgagaaaggacattgtttcttcatttctacccgaagttatacttgctttaaaggag
gtgaataaaaaaacaagaagcagagcgtatgacgtacttgttcagattgggcatgcatat
gcagatgaggaaaatggtggagacaatgagaagttacatggttacttcaatttggtggtt
ggttgcttggctggagaaaaacctcagatgattagtgctgctgttaagggagtagctcgt
ttgacatatgagttctccgatctcattgctagtgcttacaatttgcttccttcaacattt
cttctcctccaaaggagaaataaggaaatcacaaaggcaaatttaggattgttgaaggtg
ttggtggctaagtcacccgttgaaggactacacgcaaacttaaagagcatggtcgaaggc
ttactgaaatggccagaaggaaccaaaaaccttttcaaagcaaaggtgaggcttctattg
gagatgctaatcaagaaatgtggcacggaagctgttaagtctgtgatgcctgaagagcat
atgaagctcctgacaaacatccgaaaggtcaaggaacgtaaagagaaaaaatatgcagct
gcctctgagatgagtagatcgcagcattcaaaagaaacttcatcaaaggtcagccggtgg
aatgataccaagatattttctgattttgatgatgaggacgaggacagcgatggagactac
atggatggggagacgcatggccgtagcaaggcttcctctttgttgaaatctaaaccatct
gctttgagatcaaagaagagtcagaggcagagtcatcttgaagttaacgagtcagatgat
gaaccacttgacttgatggatcgttacaaaacaagatcagctcttcgatcaagtgagctt
cgcaacaaacggaaagctgattcagatgaagaagcagagtttgatgaggaaggacggtta
atcatccaagaaggagggagaggtaaaaggaaggagatctctgatccagattctgatgcc
aagagcagcaaaggtagccgtttctctgcaaacacatccaagaagaaccaaaagcggatg
aagacatcagagtctggatacgcttacacaggcaaagagtatgcaagcaaaaaggcaagt
ggggatcttaagaggaaagataagcttgaaccgtatgcgtattggccacttgatcgcaag
atgatgagccgtagaccggatcagcgtgcggttgcggtcagaggtatgtctagcgtggtt
aagctgacaaagaggttggaaggcaagagcagtgcggaagcacttgctgcgactaagttc
caaaaattcaagaggagtggtcagaagaaatcggctgggaagaagaaaagcaagtga
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