Brassica rapa (field mustard): 103857561
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Entry
103857561 CDS
T03449
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103857561
Membrane trafficking [BR:
brp04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
103857561
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
NPV_P10
Prominin
Occludin_ELL
DUF948
Syntaxin_2
MCPsignal
JAKMIP_CC3
Laminin_II
DUF713
LRS4
ANIS5_cation-bd
TMPIT
Vps53_N
DUF3450
Endotoxin_N
Zw10_N
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
103857561
NCBI-ProteinID:
XP_009133014
UniProt:
M4E2K2
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Position
A03:8585303..8587823
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AA seq
262 aa
AA seq
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MDVSAVSEELAELEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKD
FDREVKSLESGNDANTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPAE
DHMEENVLLASNMSNQELMNKGNSMMDDTDQAIERGKKIVLETINVGTDTSAALKAQTDQ
MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK
DIRDIPGLAPPAMNRRLLWNHY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcggcggttagcgaagagctggctgagctcgaaggacaaatcaatgacatc
ttccgtgctttgtcaaatggattccagaagctggagaagatcaaagatgctaataggcag
agtaggcagctcgaagaactcactgacaaaatgcgtgactgcaagagccttattaaagat
tttgatagggaagtcaaaagcttggaaagtggaaatgatgcgaacactaaccgaatgctc
aacgacagacgacaatccatggttaaagaactaaactcatatgttgctctcaagaagaaa
tactcatccaatctagcaagtaataataagcgagtagatcttttcgatggacctgctgaa
gaccacatggaagagaatgtcttacttgcttcaaacatgtccaatcaagaactaatgaat
aaaggaaactccatgatggatgatactgatcaagccattgaaaggggcaaaaagattgtt
ctggagactataaatgtgggaacagatacttcagcagctctcaaggctcagaccgatcaa
atgagtagagttgtcaatgaactcgattctatccatttctcactcaagaaggcctccaag
ctggtcaaggaaattggtaggcaggtggccacagacaaatgtattatggcatttcttttc
cttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaacaaa
gacatccgtgacatacctggcctagcaccaccagccatgaacagacgtttactctggaac
cattactga
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